Aspergillus clavatus: ACLA_014690
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Entry
ACLA_014690 CDS
T01148
Name
(RefSeq) pre-mRNA splicing factor RNA helicase (Prp43), putative
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
act
Aspergillus clavatus
Pathway
act03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACLA_014690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
act03041
]
ACLA_014690
03009 Ribosome biogenesis [BR:
act03009
]
ACLA_014690
Enzymes [BR:
act01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACLA_014690
Spliceosome [BR:
act03041
]
Complex A
U2 snRNP components
U2 related factors
ACLA_014690
Complex B
ACLA_014690
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
ACLA_014690
Ribosome biogenesis [BR:
act03009
]
Eukaryotic type
90S particles
Helicases
ACLA_014690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
SRP54
AAA_19
Flavi_DEAD
T2SSE
nSTAND3
AAA_7
AAA_23
Motif
Other DBs
NCBI-GeneID:
4706138
NCBI-ProteinID:
XP_001274458
UniProt:
A1CBB4
LinkDB
All DBs
AA seq
772 aa
AA seq
DB search
MVDPRSDSEERSRAKRQKMDKTETDPRNNPYLAHMYADESANGDSGSWTDGASEQRTTFA
GLKRHQTTAAQVKKVEAGDINPFTGQPFSSKYFSILQTRRDLPVHAQRDEFLELYQKSQI
LVFVGETGSGKTTQIPQFVLYDDMPQTQRKLVACTQPRRVAAMSVAQRVAAEMDVKLGEE
VGYSIRFEDMTSSKTCLKYMTDGMLLREAMHDHDLTRYSTIILDEAHERTMATDVLMGLL
KEVVQRRPDLKIVIMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPEQDYVEAAI
RTVLQIHATEPDGDILLFLTGEEEIEDAARKIALEADEMVRDADAGPLKVYPLYGSLPPH
MQQRIFEPAPPPRRPGGRAGRKCIISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVE
SLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEGAFKKELIDQTYPEILRSNLSSTVLEL
KKLGIDDLVHFDLMDPPAPETLMRALEELNYLACLDDDGNLTQLGRLASEFPLDPALAVM
LISSPEFYCSNEILSITALLSVPQVFVRPASQRKRADEMKNLFAHPDGDHLTLLNVYHAF
KSPEAQENLKQWCHDHFLSLRSLQSADNVRMQLLRIMEREELEMISTPFEDKKYYDNIRR
ALCAGFFMQVAKKEAQGKSVYTTIKDNQNVLLHPSTVLSYDAEWVLYNEFVLTTKNYIRT
VTAVKPEWLIDIAPTYYDVSSFPKGEIRSGLLRAAERLSRKEKMRADSGKRR
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggttgatccacgctcagattctgaagaacgttctcgtgctaagcgccagaagatggac
aaaacagagacagacccccggaacaatccttacctggctcacatgtatgcagacgagtca
gctaatggcgactcgggttcttggactgatggcgcgtccgagcagagaactacctttgcc
ggcttgaaaagacatcagacaacagcggcacaagtgaaaaaggtggaagcaggagacatc
aatccattcactggccagccgttctccagcaagtatttctctatcttgcagactcgtcgt
gatcttcccgtccatgctcagagagatgaattcctagaactctaccagaagtctcagatt
ctagtgttcgtgggtgagacgggttccggaaagaccacacagatcccccagtttgtcctg
tacgatgatatgccccagacccagcgcaaattggtcgcctgtacccagcctcgtcgagtc
gctgctatgtccgtcgctcaacgtgtggccgccgagatggatgtcaagcttggagaggaa
gtcggttacagcattcgtttcgaggacatgacaagttccaagacctgcctgaaatacatg
accgatggtatgcttctgagagaagctatgcatgatcatgaccttacgcgctacagcacg
atcattcttgacgaagctcacgaaagaaccatggctactgatgtgctcatgggtcttctc
aaagaagttgtgcagcgccgtcccgacctgaagatcgttatcatgtctgccaccctagat
gcgcaaaaatttcagcgctatttcaacgatgccccgcttctggcggtccccggtcgtacg
caccctgtcgagatcttctatacccccgagcccgaacaagattatgtcgaagccgctatt
cgcacggtcctccagatccatgccacagagcccgacggtgatatactactgttcttgact
ggtgaggaggagattgaggacgctgcacgcaagatcgccctagaggcggatgagatggtg
agagacgccgacgctggtccgctgaaggtatatccgctgtacggtagtttgcctccgcac
atgcaacagcggattttcgagcctgctcctcctccacgcagaccaggcggtcgcgctggc
cgaaagtgtattatctcgaccaacatcgccgaaacatctcttaccatcgacggtatcgtg
tacgttgtggaccccggattctcgaagcagaagatctacaacccgcgcattcgtgtcgaa
tcgctgctggtgtctcctatctccaaggcttctgctcagcagagagccggtcgtgcgggt
cgtacacggcccggaaaatgcttccgtctctacaccgagggcgccttcaagaaggagttg
atcgatcagacttacccggagattctccgttccaacctttcttcgacagttttggagctg
aagaaacttggtatcgatgacctggttcatttcgacttgatggatccccccgctcctgag
acactcatgagagccctggaagagttgaactatctggcttgtcttgacgacgacggtaac
ctcacacagctgggtcgtcttgcctcagagttccctctcgaccccgctcttgccgtaatg
ctgattagctctcctgagttttactgctcgaacgaaatcctttccattacggctttgctt
tccgttccccaggtcttcgttagacctgcatcacagcgaaagcgcgccgacgagatgaag
aatctctttgctcatcccgacggtgatcacctgactcttctgaatgtctatcacgccttc
aaaagcccggaagctcaagagaacctcaagcagtggtgtcacgaccatttcctctcgctc
agatccctccaatcggcagataatgtgcgcatgcagcttctgagaatcatggagcgcgag
gagctggaaatgatctcaacccctttcgaggacaagaagtattatgataacattcgccgt
gcgctgtgcgctggtttcttcatgcaagtcgccaagaaggaagctcagggcaagagtgtc
tacacgaccatcaaggacaaccagaacgttctccttcacccttcgactgttcttagctat
gatgcggagtgggttctttacaacgaattcgtgctcacgacgaagaactatatcagaact
gttactgcggtaaagcccgaatggctcatcgatattgccccaacgtattatgacgtctcg
agtttccccaagggcgagattcggtctggcttgctgcgtgccgcagagaggctgtcgcgt
aaagagaagatgcgtgctgattctggaaagagacgatag
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integrated database retrieval system
