Aspergillus clavatus: ACLA_014940
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Entry
ACLA_014940 CDS
T01148
Name
(RefSeq) DNA repair and transcription protein (Xab2), putative
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
act
Aspergillus clavatus
Pathway
act03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACLA_014940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
act03019
]
ACLA_014940
03041 Spliceosome [BR:
act03041
]
ACLA_014940
Messenger RNA biogenesis [BR:
act03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
ACLA_014940
Spliceosome [BR:
act03041
]
Complex B
Other components
Prp19-related factors
ACLA_014940
Complex C
ACLA_014940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_8
TPR_2
NRDE-2
Motif
Other DBs
NCBI-GeneID:
4706166
NCBI-ProteinID:
XP_001274483
UniProt:
A1CBD9
LinkDB
All DBs
AA seq
854 aa
AA seq
DB search
MPGTLLPPRSHRQHAEMDRTSGSGPDLYLIADQDTVYEQDLLRDAGSIKPWLAYIEYKQQ
NGTLYERAFIMERACKQLPRSYKLWKMYLEFRMNHLRGRNATKYRAEYQKVNALFERALI
LLNKMPKIWEMYLSFLLQQPLVTQTRRTFDRALRALPITQHNRIWKLYKAFARSASGQTA
VKIWARYMQIHPENAEEYIELLVDLGQYTEAVKRYMEILDNPRFQSKQGKSNFQLWTEMV
DLLVSQAKHIETGPQVGINVDAILRSGIDRFADQRGKLWAGLATYWIMKGNFEKARDVFE
EGITTVMTVRDFTLIFDSYVEFEESIIGSLMEAAATRSDKGNADEDADFDLDLRMLRFEQ
LMDRRPFLVNDVLLRQNPNNVIEWEKRVALWGDNKEEIVNTYTAAIAAINPKKAHGKFSE
LWVNYAKFYESGGDLDSARVIFDKAVKVPFKSVAELAETWCEWAEMELRSENFDKAVGIM
AKATQTPKKSTVDYFDETLSPQQRVHKSWKLWSFYVDLVESVATLEETRKVYERIFELRI
ATPQTVVNYANLLEEHKYYEDSFKVYERGLDLFSYPVAFELWNLYLTKAVDRKIGIERLR
DLFEQALDGCPPKFAKPLYLMYGNLEEERGLARHAMRIYERATRAVSDEDRFEMFEFYIT
KSASNFGLTSTRPIYERAIAALPDQEAKEMCLKFAEMERRLGEIDRARAIYGHASQFCDP
RTNAPFWQKWEAFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQAIARSQQRAQEGG
KEQGDEETDMDGAKERADAMAALERQARAPVGFVAASTGPEGGNRPPPAGQEAPPAAAPV
NPDAIDLDDDMDAE
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgccagggacactcctgcccccgagatcccaccggcaacacgcagagatggaccgaacg
tcgggctcagggccagatctttatctgattgccgaccaggacaccgtttatgagcaggat
cttcttcgcgatgccggcagcatcaaaccttggcttgcttatattgagtataagcagcag
aatgggacactttacgagcgggctttcatcatggagcgtgcttgtaagcagcttcccaga
tcctacaaactttggaaaatgtatttggaatttcgaatgaaccatctccggggccgcaat
gcgacaaaataccgagctgaataccagaaggtgaacgcgttgttcgaacgagcccttatc
cttctcaacaagatgcccaagatctgggagatgtatctctcttttctgcttcagcagccc
ttagtgacgcagactcgacgaacattcgaccgtgcactccgtgctctgcctatcacacag
cataaccggatctggaaattatataaggcttttgcgcgctcagcatctgggcaaacggcc
gtgaagatttgggctcgatatatgcagatacacccggagaatgctgaagaatatatcgaa
ctgctcgtcgacttgggccagtacacagaggctgtgaagcgctacatggagatacttgac
aacccacgatttcagtcgaagcaagggaagagcaactttcagctgtggaccgagatggtt
gacctgctcgtttctcaggcaaaacatattgagactggtccgcaagtgggcatcaatgtc
gacgccatcctacggagtggaattgatcggtttgcggatcagagaggaaagctttgggct
ggtctggcgacctattggatcatgaaaggcaacttcgagaaggcacgcgatgtttttgaa
gagggtatcactaccgttatgaccgttcgcgactttactctgatctttgactcatatgtc
gaattcgaagagtcgatcatcggaagcttaatggaagcggcagccactcggtctgacaaa
ggaaatgccgacgaagatgcagatttcgacctcgacctgcgtatgctgagattcgaacag
cttatggatcgtcgaccattccttgtcaatgacgtcctgctccggcaaaatcccaacaat
gtcattgaatgggagaagagggtggctctatggggcgataacaaagaggaaatcgtcaac
acatacacggccgccattgctgctatcaatccgaagaaggctcacggaaagttctctgaa
ctctgggtcaattacgccaagttttatgagagcggtggggatctggattccgctagagtt
atctttgataaggctgtcaaggttcccttcaaatcagttgctgaattagcagagacctgg
tgcgaatgggccgagatggagctgcggagcgagaactttgacaaggccgttggcatcatg
gccaaggctacacagacgcccaagaaatccaccgtggactacttcgacgagaccctgtct
cctcagcaacgcgttcacaagagttggaaactttggagtttctatgttgatctcgttgag
agtgttgcgactctggaagagacgaggaaggtatacgagagaatctttgaactgcgcatc
gcaacccctcaaactgtggtcaactatgccaatctgctggaagaacacaaatactatgaa
gattccttcaaggtgtatgaacgaggcttggatctcttcagctatccagttgctttcgag
ctttggaatctatacctcaccaaagcagtggaccggaagattggcatcgagagactgcgg
gatcttttcgaacaggctctcgatggatgtcctcccaagtttgcaaagcccctgtacctg
atgtacggcaacctcgaagaagagcgcggtcttgcccgacatgcgatgaggatttacgag
cgtgctactcgcgcggtctcggacgaggacagatttgagatgttcgagttctacatcacc
aagtctgcctccaacttcggactgacatccacacggccgatctacgaacgagcgatcgcg
gctctgccggaccaggaagccaaggaaatgtgcctcaagttcgcggaaatggaacgaaga
ctgggcgaaatcgaccgcgcacgcgcaatctacggccacgcttcccagttctgcgatccc
cgcaccaacgcgcccttctggcagaagtgggaggcattcgaggtccagcatggaaacgag
gacaccttcaaggagatgctccgcatcaagagaagcgtccaagcacagtacaacaccgac
gtcaacttcattgcctcccaggcaatcgcccgcagccagcagcgcgcccaggaaggcggc
aaagaacagggagacgaggaaacagacatggacggcgccaaggagcgcgccgatgccatg
gcagccttggaacgccaggctcgcgccccggtcggcttcgttgccgccagcacagggcct
gagggcggtaaccgcccgcccccagcaggccaagaagcgccgccggccgctgcccccgtc
aacccggacgcaattgaccttgatgatgatatggatgccgaatag
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