Aspergillus clavatus: ACLA_016520
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Entry
ACLA_016520 CDS
T01148
Name
(RefSeq) 3'-5' exoribonuclease (Csl4), putative
KO
K07573
exosome complex component CSL4
Organism
act
Aspergillus clavatus
Pathway
act03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACLA_016520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
act03019
]
ACLA_016520
Messenger RNA biogenesis [BR:
act03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
ACLA_016520
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
ACLA_016520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
IFTAP
Motif
Other DBs
NCBI-GeneID:
4706690
NCBI-ProteinID:
XP_001274632
UniProt:
A1CBT8
LinkDB
All DBs
AA seq
253 aa
AA seq
DB search
MASTLPKLAIPGQQLGSITSYFAGPGTHVKNANIYASIAGPVIIEQTQPSSKVKAIVSVS
RNLNTQPGLVAKPTPAPSTPAKTTAAKPKLRYNTLPAVDSIVLARVTRVQKRQATVSILV
VLDASSSAQIPDSSKTASDNDNIASILTSAANPENHSNSDELRFQALIRKEDVRAVEKDR
VVMDEMFRVGDIVRGTVISLGDQSFYYLTTARNDLGVVMARSEAGNMMFPVSWKEMRDPV
TGAAELRKVARPF
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggctagcacactgcccaagctcgctattccaggccagcaactaggttcaatcacttct
tactttgcaggtccaggtactcatgtgaagaatgccaatatttatgcatccattgctggg
ccggtgattattgaacagacccagccaagctcgaaagtaaaagctattgtcagtgtttcg
cggaacttgaacacacagccaggactcgtcgcgaaacctactcccgctccctccacaccg
gcaaagaccacagccgcgaagccaaagttgaggtacaatacattgcctgcagtcgactcg
attgtcctggcgcgcgttactcgtgtgcagaagcgccaggccacagtgtccattctggtc
gtgctagacgcatcgagcagtgcccagatcccggattcctcgaagacagcttccgacaac
gacaacatcgcctctatcctcacttcggccgcaaaccctgagaaccatagcaactcagac
gagctccgctttcaggcacttatccggaaggaggatgtgcgtgctgtcgagaaagaccgt
gtcgtcatggacgagatgttccgcgttggagatatcgtgcgtggcaccgtgatctccctg
ggcgatcagagcttttattacctcaccaccgcgcggaacgatctcggtgtcgtgatggcc
cgcagcgaagctggtaatatgatgttccctgtcagctggaaggagatgagagaccccgtc
actggcgcagcagaattgcgaaaggtggcccgtccgttttga
DBGET
integrated database retrieval system
