Aspergillus clavatus: ACLA_021120
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Entry
ACLA_021120 CDS
T01148
Name
(RefSeq) small nuclear ribonucleoprotein (LSM7), putative
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
act
Aspergillus clavatus
Pathway
act03018
RNA degradation
act03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACLA_021120
09123 Folding, sorting and degradation
03018 RNA degradation
ACLA_021120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
act03019
]
ACLA_021120
03041 Spliceosome [BR:
act03041
]
ACLA_021120
Messenger RNA biogenesis [BR:
act03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
ACLA_021120
mRNA degradation factors
5'-3' decay
Lsm complex
ACLA_021120
Spliceosome [BR:
act03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
ACLA_021120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
4700764
NCBI-ProteinID:
XP_001268830
UniProt:
A1CP33
LinkDB
All DBs
AA seq
140 aa
AA seq
DB search
MSERGSFRGGRGRGGGHDRSGGRGGAHSSQHRGGGAGGGAQQQHQQEKPKKENILDLSKY
MDKEVKVKFNGGREVSGMLKGYDQLMNLVLDDVKESMRDDEGNETTRSLGLIVARGTLIV
LISPADGSEEIANPFVQQEE
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacgaggttcgttccgaggaggtcgtggtcgcggcggaggtcacgatcgatct
ggcggccgtggcggtgcccactcctcccagcacagaggtggcggtgcgggtggcggtgcg
caacagcagcaccagcaggagaagcccaagaaggaaaacatcctcgatctgtccaagtat
atggataaggaggttaaggtgaagttcaatggcggcagagaggtgagcggaatgctcaag
ggttatgaccagctgatgaacttggtgctggatgatgtgaaggagagtatgcgtgatgac
gagggcaacgaaaccacccgctccctcggtctgattgtcgcccgtggtactctgattgtg
ctcatctctcctgcggatggcagcgaggaaatcgccaatcctttcgtacagcaagaggaa
tag
DBGET
integrated database retrieval system
