Aspergillus clavatus: ACLA_022410
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Entry
ACLA_022410 CDS
T01148
Name
(RefSeq) regulator of nonsense transcripts, putative
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
act
Aspergillus clavatus
Pathway
act03013
Nucleocytoplasmic transport
act03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
ACLA_022410
03015 mRNA surveillance pathway
ACLA_022410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
act03019
]
ACLA_022410
Enzymes [BR:
act01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
ACLA_022410
5.6.2.5 RNA 5'-3' helicase
ACLA_022410
Messenger RNA biogenesis [BR:
act03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
ACLA_022410
mRNA cycle factors
Common to processing body (P body) and stress granule
ACLA_022410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
DEAD
SLFN-g3_helicase
UvrD-helicase
NPHP3_N
PIF1
NAT10_TcmA_helicase
nSTAND3
AAA_22
ATPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
4701772
NCBI-ProteinID:
XP_001268953
UniProt:
A1CPF6
LinkDB
All DBs
AA seq
1079 aa
AA seq
DB search
MAAIGDGRTTADLDETTLNLSGGPRPRRHDDDDEGSDNFGDDDGDSVTSAAVTGHRKNEG
HAEEEKELPPHACAYCGIHNPSSVVKCLACSKWFCSARGNTSSSHIVNHLVRARHKEVQL
HPGSSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQ
PLIEDRSFLPWLVAAPSDQEQLRARHLSPQLIAKLEEMWKENSQATFADLEKATAVDDEP
APVLLRYDDAFQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASFILPK
LELGDVKLAVGDEMRLKYSGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTEC
THNFTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQLPKKFSV
PGLPELNGSQINAVKSVLQRPMSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNV
AVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRLNDSNIELIKLNQLKAELG
ELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLSKLKFRTVLIDESTQSAEPE
CMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMH
PCLSQFPSNMFYEGSLQNGVSAIDRLRRDVDFPWPVVDSPMMFWSNLGNEEISASGTSYL
NRTEATNVEKIVTRFFKAGVHPQDIGIITPYEGQRSYIVSSMQANGTFKKEHYKEIEVAS
VDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLW
NCLLQHFKEQHCLVEGPLSNLQESLIQFSRPKQAYRGPQRFQMAYNHASNVTSGMMNGRN
GHRNEFHDSGSVVGYIPDDVSSVHSSALGGVSVPSGYPPMFQNFTDSWPALSGARRANGA
RGKGAPSVAGESVAATESDVTSSVIDGRSVDQGGVSLAGLSIHDMSRQPSLSQSDRLKRY
VESGGREPYRAGVPDNSSIFGGSSASIRVTRGVPGLIHDDDDTRSVSTAFASQVGGNYD
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggctgctatcggcgatggtaggactacagcggatctagatgagactacattgaatctg
tccgggggtccgcgcccaaggcgacatgatgatgatgatgaagggtccgacaacttcggg
gatgacgatggcgatagtgtcaccagtgctgctgtgactggacataggaagaatgagggc
cacgctgaggaggaaaaagagctccccccacatgcatgcgcgtattgtggcattcataat
ccaagcagtgttgtcaaatgccttgcttgtagcaaatggttctgcagcgctcgcggcaac
acatcctcttcgcacattgtcaatcatcttgtccgagctcggcacaaggaagtccagtta
catcccggctcgtcgttaggagacactatcctagagtgttacaactgtggaacaaagaat
gtgttcttgcttgggtttatcccggcgaagtctgatactgttgtggttttactttgccga
caaccctgtgctgcgatgccgtcgtctaaagatatgaactgggacacatcgcgctggcag
ccactgattgaagatcgctcgtttctcccatggcttgtcgctgctccatcggaccaagaa
cagctcagagcacgtcaccttagcccgcaattgatcgcgaaattggaggagatgtggaaa
gagaactcgcaggctacgtttgcggacctcgagaaagctacggcagttgacgacgagccc
gccccggtgctcttgcgctatgatgacgccttccagtatcagaatatctttggcccgtta
gtcaagattgaagccgactacgaccgcaagctgaaggaatcccaatctcaagatggtctt
atcgtccgctgggatttggggttgaacaacaaacaccttgccagctttattctgccaaag
cttgaacttggggacgtgaagttggctgttggagatgaaatgcgcttaaaatacagcggc
gaattgcgacccaagtgggaaggagtaggctatgtcatcaagattccaaacaatcaatcc
gacgaggtgactatcgagttgcgcgcaaaaggcgaccacaagtctgtccccacagagtgt
acccacaacttcactgcggattatgtatggaaatccacctcgttcgatcgtatgcagctc
gctatgaagacctttgcggtcgatgagatgagcgtctcgggctacatcttccatcgcctt
ctaggtcacgaagtcgctgctgcgccgatgaagactcaattaccaaagaagtttagtgtt
cctggccttccggagctcaatgggagccagatcaatgcggtcaagagtgtgctacagcgg
ccaatgagtctgattcaaggtcctccgggtaccggaaagactgttacctctgctactatc
atctatcatcttgccaagatcaatggaggccaagtcttggtctgtgccccttcgaacgtt
gcggtcgaccaactgtgcgagcgaattcaccggactggtctcaagactgtgcgtgtaact
gcgaaatctcgtgaagatgttgagtctccagtgggattcctctccttacatgagcaagtc
cgcttgaatgacagcaacatcgaactcatcaagctgaaccaactcaaggccgaattgggg
gagttgtcgagtcaagacgagaagcggctgaaacaactcactcgttcagctgagcgcgaa
atcttgaacaatgccgacgttatctgctgcacttgcgttggtgctggcgacccccggctt
tccaaactcaaattccgcactgtcttgatcgatgaatcgacgcagtctgcagagcccgag
tgtatgatccccttggttctcggctgcaagcaagttgttctcgttggtgatcaccagcaa
cttggaccagtcatcatgaacaagaaagctgccaaagctggtctcaaccagtctctcttt
gaacggcttgttattcttggatgttctccgattcggctgaacgttcagtaccggatgcac
ccatgtttgtcgcagttcccgtcgaacatgttctatgaaggatcattgcagaacggtgtt
tccgccattgatcgtcttcgtcgcgacgttgacttcccctggcccgttgttgacagtcct
atgatgttttggtccaaccttggcaacgaagaaatttccgcctcgggaacatcgtatctc
aatcggacggaagccacaaacgtggagaagattgtgacccgctttttcaaggcaggggtg
cacccacaggatattggtatcatcacgccttatgagggtcagcgtagctacattgtcagt
tctatgcaggccaatggcaccttcaagaaagagcactacaaggagattgaggtagcgtcg
gttgatgctttccagggtcgggagaaggactttatcattctctcttgtgtgcgttccaat
gaccatcaaggcatcggtttcttgagcgacccacgtcgtttgaacgttgcacttacccga
gcaaagtatggtctcgtgattctcggaaaccccaaggtcttgtccaagcaccctctctgg
aactgcctcttacaacacttcaaagagcaacactgtctcgttgaagggccactttccaac
ctccaagagtctctcattcagttcagtcgtcctaagcaggcataccgagggccccaacga
ttccagatggcttacaaccatgcatcaaatgtcaccagtggtatgatgaatggtaggaac
ggacaccggaacgagtttcacgactcaggctccgttgttgggtatattcctgacgatgtt
tcttctgtgcactcttccgccttgggtggcgtgagtgttccttcaggttatccgcctatg
ttccagaactttactgattcctggcctgccctttctggagcgcgacgagcgaatggcgcc
aggggtaagggagctcccagtgttgccggggagtccgtggcagctactgagtccgatgtc
acaagcagcgtcattgatgggagaagtgttgatcaaggcggtgttagccttgctggattg
agcatccacgatatgagcagacagccgagtctcagtcagtccgatcgtttgaagcgttac
gtggagtcaggggggcgtgagccatatagggctggtgtgcccgacaacagtagtattttc
ggcggtagctctgctagtatccgtgtgactcgcggtgtccctggacttatccacgatgat
gacgatacacgcagcgtgtctactgccttcgcaagccaggtcggaggcaactacgactga
DBGET
integrated database retrieval system
