Aspergillus clavatus: ACLA_028350
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Entry
ACLA_028350 CDS
T01148
Name
(RefSeq) small nucleolar ribonucleoprotein complex subunit (SOF1), putative
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
act
Aspergillus clavatus
Brite
KEGG Orthology (KO) [BR:
act00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
act03009
]
ACLA_028350
04121 Ubiquitin system [BR:
act04121
]
ACLA_028350
Ribosome biogenesis [BR:
act03009
]
Eukaryotic type
90S particles
Other 90S particles
ACLA_028350
Ubiquitin system [BR:
act04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
ACLA_028350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_HPS5
WD_LRWD1
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_SCAP
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
4701568
NCBI-ProteinID:
XP_001269536
UniProt:
A1CR39
LinkDB
All DBs
AA seq
466 aa
AA seq
DB search
MVSSTTTLFQISHQSNVFKQKIKALSRSTASQQAPGSAVVRQARNLDPAQHPFERAREYT
RALNAVKLERLFAAPFLGQMGDGHVDGVYTMAKDPGSLERFASGSGDGVVKVWDLTTQGE
IWNTQAHENIVKGLCWTPERKLLSCASDKTIKLFDPYNSSSDSPPLATYLGQSAFTGVTH
HRTLPYFAASSSQISIYDLSRPSSTPSQVLHWPTSVDTITSLAFNQTETSIIGSTAIDRS
IIMYDLRTSSPVHKLVLRLASNAISWNPMEAFNFAVANEDHNAYIFDMRKMDRALNVLKD
HVAAVMDIEFSPTGEELVTASYDRTVRLWSRTHGHSRDIYHTKRMQRVFSVKFTPDNKYI
LSGSDDGNVRLWRAKASDRSGIKSARQRQKLEYDQALISRYSHMPEIRRIKRQRHVPRTV
KKAGEIKREELGAIKRREENVRKHAKKGALPPRRSEREKMILTTEQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggtaagttctacgactactttatttcaaatttctcatcagtctaacgtattcaaacag
aaaatcaaagccctctctcgctccaccgcgtcgcagcaggcgccgggatctgctgttgtc
cgacaagctcgcaatctagatccagcccagcatccgttcgaacgcgcaagagaatatact
cgtgcactcaatgccgtcaagctagagcgattgtttgccgcaccgtttctgggtcagatg
ggcgacggtcatgtggacggtgtctacacaatggccaaagatcctggctctctggagcga
ttcgccagtggcagcggtgacggtgtcgtcaaagtctgggatttgaccactcagggtgag
atttggaacacacaggcacatgagaacatcgtcaaggggttgtgctggactccagagcgg
aagctgctctcatgtgcgagcgataagaccatcaaactcttcgacccatacaattcttcg
tccgattctccaccactggccacttatctcggtcagagcgctttcaccggggttacacac
caccgcacactaccttattttgctgcgtcgtcttcccagatctccatctacgatctctcg
cggccctcctccacaccatcgcaggtacttcactggcccaccagtgtggacactatcacc
tcgctggcattcaaccaaacagagacttccatcattggatcaacggccattgatcgctct
atcatcatgtatgatcttcgaacttcgtcgcctgttcacaagcttgtcctacggttagca
tcaaatgctatctcttggaacccaatggaggcattcaatttcgcggtggccaacgaagat
cacaacgcttacatcttcgatatgagaaagatggaccgcgcactgaatgtgctcaaggat
cacgttgctgcagtcatggatatcgaattcagcccgactggtgaagagctcgtcacggct
tcgtacgatcgaacagtgcgtctctggagcaggacacatggtcactcgcgtgacatctat
cacaccaagcgaatgcaacgtgtcttctctgtcaaatttactcccgacaacaagtatatc
ctctctgggtccgacgatggcaacgttcgactgtggcgggccaaggcctccgaccgcagt
ggtatcaagagtgcccgtcagagacagaagttggagtatgatcaggctctaatttcgaga
tactcacatatgcccgaaatcagacggatcaagcgccagcgtcacgtgccaagaaccgtg
aagaaggcgggcgaaatcaagagagaggaacttggtgcgattaagagacgtgaagagaat
gtccgcaaacatgccaagaagggcgccctgcccccgaggcgcagtgagcgtgaaaagatg
atcttgacaaccgagcaataa
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