Aspergillus clavatus: ACLA_031620
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Entry
ACLA_031620 CDS
T01148
Name
(RefSeq) mRNA cleavage and polyadenylation specificity factor complex subunit, putative
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
act
Aspergillus clavatus
Pathway
act03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
ACLA_031620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
act03021
]
ACLA_031620
03019 Messenger RNA biogenesis [BR:
act03019
]
ACLA_031620
Transcription machinery [BR:
act03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
ACLA_031620
Messenger RNA biogenesis [BR:
act03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
ACLA_031620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_9
zf-CCCH_12
Nab2-zf4
Motif
Other DBs
NCBI-GeneID:
4701413
NCBI-ProteinID:
XP_001269855
UniProt:
A1CS08
LinkDB
All DBs
AA seq
255 aa
AA seq
DB search
MATDVQSAAVRILNTDSTRDPSYNHFSFGPFLRQSFGFGLASDVPVCKAYSEGHCPLGPA
CPDRHPTPSRVTTSTTTASGLAPSTTHGSLVCKHFLKGLCKKGLKCEYLHEYNLRRMPEC
QSFTRSGYCPNGDDCLYQHVREQARLPPCENYDQGFCELGPLCSKRHVRRRICKYYLAGF
CPEGKACTDAHPRWSENLPKPTMRVDKTEEELEREKALIREEQEREKEREREWRSERGRG
GGFMRGGRFRGRGRG
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagatgtccagtccgctgcagtgcggatcctaaacactgacagtacccgagac
cctagctacaaccacttctccttcggccccttcttacgccaaagcttcggattcggactc
gccagcgatgtcccagtgtgtaaagcctacagcgaaggccattgtcccttaggaccagcc
tgtccggaccgacacccgactccatcgcgggttacaacgtcaacgacgacggcatccggg
ctggctccgtcgacgacacatggctccctcgtgtgcaagcattttctcaagggtctctgc
aagaagggcctcaagtgcgaataccttcatgaatacaacctccgccgcatgccagaatgc
cagtcgttcacgcggtccggctactgccccaatggcgacgattgcctctaccagcacgtg
cgcgaacaagctcgattaccgccctgcgagaactacgaccaaggtttctgcgagctgggc
ccgctctgctccaagcgccatgtccgccgtcggatctgcaaatactaccttgctggcttc
tgcccggaggggaaagcgtgtacggatgcgcatccgcgctggtcggagaatctccccaaa
ccgaccatgagggttgataagacagaggaggaactggagcgggaaaaggctcttattcga
gaagagcaggagagggagaaggagcgggagcgcgagtggaggagcgagcgtggtcgaggc
ggcggcttcatgcgtggtggtcgattccgcggacggggtcgcggatag
DBGET
integrated database retrieval system
