Aspergillus clavatus: ACLA_033830
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Entry
ACLA_033830 CDS
T01148
Name
(RefSeq) exosome complex exonuclease Rrp4, putative
KO
K03679
exosome complex component RRP4
Organism
act
Aspergillus clavatus
Pathway
act03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACLA_033830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
act03019
]
ACLA_033830
Messenger RNA biogenesis [BR:
act03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
ACLA_033830
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
ACLA_033830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
RRP40_S1
ECR1_N_2
DUF6496
Motif
Other DBs
NCBI-GeneID:
4703135
NCBI-ProteinID:
XP_001270606
UniProt:
A1CJ56
LinkDB
All DBs
AA seq
387 aa
AA seq
DB search
MAITILPPVVEDVTVPYPDSDLDSMSIDSDGGVGLAAERASRPSKRPRLVEGTKVGAGIV
TPGDVVTDDPQWMRGHGTYANPLSTSIIATVAGTVQKTNKLLSVQPLRARYTPEIGDLVV
GRIVEVQSRRWKVDVAAPLLAQLPLSAINLPGGILRRRTSADELQIRTFFSEGDLVVAEV
QSVHSDGAASLHTRSLKYGKLRNGVFLAVAGTGGSGASSSTVKGAAGTGTAPAGTSGTGG
VVRSRRQVWSISTANGGGDVNIILGVNGYIWIEKLADGAAAASSTTESVSITRMEEMVSS
SIYSSQNDEIPPQTRREIARLAQCIHVLVHGGIRVDEDTVMAAYEASLQVDLEVGDDEDE
DDRRKEGREYLEGDKSQRILELVMAQQ
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcactattctccctcccgttgtggaggatgtcactgtcccatatcccgattca
gacctcgattcgatgtcgatagattcagacggcggagtcgggttggccgcagaacgggcc
tctcgccccagcaaacggcctcgtcttgtggaaggaacaaaggttggcgcagggatcgtg
actcctggtgatgtcgtgacggatgatccgcagtggatgagaggtcacggtacctacgca
aaccctctgtcgacgtccatcattgccaccgtcgccggtacggtacagaaaaccaacaag
ttactctccgtccagcctctgcgagcccggtatacccccgaaatcggcgatctggtggtc
gggcgcattgtggaggtccagtcacgacgatggaaggtcgatgtcgccgcgccgctgctt
gcccaattaccactctctgccatcaacctgccgggcggtatcctgcgtcggcggacaagc
gcggacgagttgcagattcggacctttttcagcgaaggagatttggtagttgcggaggtt
cagagcgtgcattcagatggcgccgcatcgttacatacgcggtcgttaaaatacgggaag
ctcaggaatggtgttttcctggctgttgcgggcactggtggaagcggcgcttcgagctcg
acggtgaagggggctgccgggacgggaacagcacctgcgggcacatcggggactggtggt
gtggtgcgctctcgacgacaggtctggtcaatcagcaccgccaacggcggcggcgatgtc
aatatcatccttggggtgaacgggtacatctggattgagaagctcgccgatggggcagcc
gcggcatcttccacgacggaaagtgtgtcgatcacacgaatggaggaaatggtatccagc
tcgatctactccagccagaatgatgagatcccgccgcagacccgacgggagattgcccgg
ctggcgcaatgtatccatgttctggtccatgggggcatccgcgtggatgaagacacggtg
atggcggcctacgaagctagtttacaggtggatctggaggttggagacgatgaggatgag
gatgaccggagaaaagaaggacgggagtatctcgagggcgacaaatcccaaagaattctc
gaactggtcatggcacagcagtag
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