KEGG   Aspergillus clavatus: ACLA_035980
Entry
ACLA_035980       CDS       T01148                                 
Name
(RefSeq) polymerase (RNA) II (DNA directed) polypeptide D
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
act  Aspergillus clavatus
Pathway
act03020  RNA polymerase
act03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:act00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ACLA_035980
  09124 Replication and repair
   03420 Nucleotide excision repair
    ACLA_035980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:act03021]
    ACLA_035980
   03400 DNA repair and recombination proteins [BR:act03400]
    ACLA_035980
Transcription machinery [BR:act03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     ACLA_035980
DNA repair and recombination proteins [BR:act03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      ACLA_035980
SSDB
Motif
Pfam: RNA_pol_Rpb4 Cut8
Other DBs
NCBI-GeneID: 4703155
NCBI-ProteinID: XP_001270821
UniProt: A1CJS1
LinkDB
AA seq 148 aa
MSVQLPPATHRKRTLPQGELEAASTLKLGADQNTHTLSLSEARLVINKVLENKRRGGKKY
EEPENLTKTLDYLEVFARFKDEENIKAVERLLNSHTELEMFERSQLGSLCCDNAEEAKSL
IPSLQHKISDGELQELLDELTKLRNFTE
NT seq 447 nt   +upstreamnt  +downstreamnt
atgagcgtccaactgccccccgccacacaccgcaaacgcaccctcccgcaaggcgagctc
gaagccgcctcgacgctgaaactcggcgcggaccaaaacactcacacgctctcgctctcc
gaggcgcggctggtcatcaacaaagtcctcgagaataagcgccggggcggcaagaaatac
gaggaaccggaaaacctcaccaagacgctggactacctcgaggtgtttgcgcggttcaag
gacgaggagaatatcaaggcggtggagcgcttgctgaactcgcatacggaactggagatg
tttgagcggtcgcagctggggagtctgtgctgcgataatgctgaggaggctaagtcactg
attccgagtctgcagcataagatctcggatggggagttgcaggagctgttggatgagttg
accaagttgcgcaatttcaccgagtag

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