KEGG   Aspergillus clavatus: ACLA_045400
Entry
ACLA_045400       CDS       T01148                                 
Name
(RefSeq) nuclear pore complex subunit (SEC13), putative
  KO
K14004  protein transport protein SEC13
Organism
act  Aspergillus clavatus
Pathway
act03013  Nucleocytoplasmic transport
act04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:act00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    ACLA_045400
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    ACLA_045400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:act03019]
    ACLA_045400
   04131 Membrane trafficking [BR:act04131]
    ACLA_045400
Messenger RNA biogenesis [BR:act03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     ACLA_045400
Membrane trafficking [BR:act04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    ACLA_045400
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    ACLA_045400
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    ACLA_045400
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 EIF3I Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_SCAP Beta-prop_WDR75_2nd NBCH_WD40 Beta-prop_DCAF12 Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 4703825
NCBI-ProteinID: XP_001271501
UniProt: A1CGS0
LinkDB
AA seq 295 aa
MIHDAGLDYYGRRLATCSSDKTIKIFEIEGETHRLAETLKGHEGAVWCVAWAHPKFGTIL
ASSSYDGKVLIWREQHQSPTSPAAGSAWTKVFDFSLHTASVNMVSWAPHESGCLLACASS
DGHVSVLEFRDNSWTHQIFHAHGMGVNSISWAPAAAPGSLISSNPGPGQQRRFVTGGSDN
LLKIWDYNPESKTYNITQTLEGHSDWVRDVAWSPSILSKSYIASASQDKTVRIWTSDASN
PGQWTSQQLEFDTVLWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKVKDIEE
NT seq 888 nt   +upstreamnt  +downstreamnt
atgattcacgacgccggattggactactacgggcgcagattagcgacatgctcgtccgat
aagacaataaagatctttgagattgagggagagacacatcgcttggctgagactttgaag
ggacacgaaggcgccgtatggtgtgtagcatgggctcaccctaagtttggcacgatcctt
gcctcgtcttcatatgatggcaaggtgcttatctggcgtgaacaacaccaaagccccacc
tctccagctgcaggcagtgcctggacaaaggtttttgacttctctctccacactgcctcg
gtgaacatggtctcatgggctccgcatgaaagtggatgtcttctcgcctgtgcttcttcg
gatggccatgtcagcgtcctcgagttccgcgacaacagctggacccatcagatcttccac
gctcacgggatgggcgtcaactccatcagctgggctcctgctgctgctcccggcagcttg
atcagttccaaccctggacccggtcagcagcggagattcgtgactggcggcagtgacaac
ctcctcaaaatctgggactacaaccctgaaagcaagacttacaacatcacgcaaaccttg
gagggccactccgactgggtccgtgacgtcgcctggtctcccagcatcctttccaaatcc
tacattgcttctgcatctcaagacaagacagttcgcatctggacttccgatgcatcgaac
cccggccagtggactagccagcagcttgaattcgacactgtcctctggcgagtgagctgg
agccccagtggaaacatacttgccgtaagcggaggggacaacaaagtcagtctgtggaag
gagaacctgaagggacaatgggaaaaggtaaaggacatcgaggaatag

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