Aspergillus clavatus: ACLA_065250
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Entry
ACLA_065250 CDS
T01148
Name
(RefSeq) U5 snRNP complex subunit, putative
KO
K12857
Prp8 binding protein
Organism
act
Aspergillus clavatus
Pathway
act03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACLA_065250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
act03041
]
ACLA_065250
Spliceosome [BR:
act03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
ACLA_065250
Complex C
U5 SnRNP specific factors
ACLA_065250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
4704524
NCBI-ProteinID:
XP_001272317
UniProt:
A1CG11
LinkDB
All DBs
AA seq
359 aa
AA seq
DB search
MSGEKRPAQQAFGSSNQLVVKRKKSDGDLNAGTAVVKSSSQNGTLVQAIPRTSGLDAPIM
ELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQCENYGILTGHRGAVLDLQWSRD
SRAIFSASADMTIADWDVETGQRIRRHVGHEEIINCLDISKRGQELLVSGSNDGCIGIWD
PRQKDAIEYLETELPITAVALSEAGNEIYSGGIDNTIYVWDLRKKAVAYSMSGHTDTITS
LEISPDSQSLLSNSHDSTVRTWDIRPFAPTNRHIRTYDGAPMGLEKNLIKASWDPKGEKI
AAGSGDRSVVVWDFKSGKLLYKLPGHKGTVNDVRFSPNNEPIIVSGSSDRTLMLGELGK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgaaaaaagacctgctcagcaagccttcggctcatcaaatcaactggtcgta
aaacgaaagaagtccgatggtgatctcaacgctggcacagccgttgtaaagagctcctct
cagaatggaaccctcgtgcaagcaattcctcgcaccagtggccttgatgcccccattatg
gaacttactggtcattccggggaggtctttgctgtacgattcgaccccaccgcgcagcac
atagcatctggctcgatggatcggtctatcttattatggaacacctacggacaatgcgag
aattacggcatccttacgggacatcgtggagcggtccttgatttgcagtggtcacgagac
tcacgggcgatcttctctgcatcggcagatatgaccattgcggactgggatgtagaaact
gggcagagaatacggcgccacgttggccacgaggagatcatcaactgtctggatatcagt
aaacgaggtcaggagctgttggtgagcggaagcaacgatggatgcattggtatctgggat
ccacgacagaaggacgctattgaatatcttgaaacggagcttcccattactgcggtcgct
ctttcggaggcaggaaacgagatttacagcggaggtattgataacacgatttacgtctgg
gaccttcggaagaaagctgtcgcgtactccatgagtggacatacggataccatcacatca
ctggaaatctcgccggattcgcagtcgcttctttccaactcccatgactcgacagtgcgc
acttgggatatccgacctttcgcgccgaccaaccggcacatccgtacatacgatggcgcc
cctatgggactcgagaagaacttgattaaggcaagctgggacccgaaaggtgaaaagatt
gcggctggaagcggtgatcggagtgttgtggtttgggatttcaaatccggaaagcttctg
tataagcttcccgggcataaaggcacggtcaacgatgtacgattttcgccgaataatgaa
cctatcatcgtatctggatcgtcggatcgaaccctcatgcttggcgaactcgggaaatga
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