KEGG   Aspergillus clavatus: ACLA_070910
Entry
ACLA_070910       CDS       T01148                                 
Name
(RefSeq) small nuclear ribonucleoprotein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
act  Aspergillus clavatus
Pathway
act03018  RNA degradation
act03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:act00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    ACLA_070910
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACLA_070910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:act03019]
    ACLA_070910
   03041 Spliceosome [BR:act03041]
    ACLA_070910
Messenger RNA biogenesis [BR:act03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     ACLA_070910
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     ACLA_070910
Spliceosome [BR:act03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    ACLA_070910
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 4707593
NCBI-ProteinID: XP_001275484
UniProt: A1C6N7
LinkDB
AA seq 119 aa
MLPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILKEVVQASPEGDRFFRLPEVY
IRGNNIKYLRIPEEIVEMVKEQQQNQPPNRNRGGREGRGDRGRGGGRGGRGRGRGRGGS
NT seq 360 nt   +upstreamnt  +downstreamnt
atgttaccattgggccttctaacggccgcccagggccacccaatgctcgtggagctcaag
aacggcgagacgctaaacggacatcttgccaactgtgacaactggatgaacttaatactc
aaggaagtggttcaggctagtcccgagggtgaccgttttttcagattgcctgaggtttac
atccgaggaaacaatatcaagtatctgcggatccccgaagagattgtggagatggtgaag
gaacagcagcagaatcagccaccgaatcgcaaccgtggcggtcgtgaaggaaggggagat
agaggccgtggtggtggtcgcggaggccgaggtcggggccggggccggggtggcagctaa

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