Aspergillus clavatus: ACLA_074190
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Entry
ACLA_074190 CDS
T01148
Name
(RefSeq) small nuclear ribonucleoprotein (LSM2), putative
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
act
Aspergillus clavatus
Pathway
act03018
RNA degradation
act03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACLA_074190
09123 Folding, sorting and degradation
03018 RNA degradation
ACLA_074190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
act03019
]
ACLA_074190
03041 Spliceosome [BR:
act03041
]
ACLA_074190
Messenger RNA biogenesis [BR:
act03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
ACLA_074190
mRNA degradation factors
5'-3' decay
Lsm complex
ACLA_074190
Spliceosome [BR:
act03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
ACLA_074190
Complex C
U2 snRNP components
ACLA_074190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LRR_9
Hfq
SM-ATX
Gemin7
Motif
Other DBs
NCBI-GeneID:
4707803
NCBI-ProteinID:
XP_001275808
UniProt:
A1C7L1
LinkDB
All DBs
AA seq
98 aa
AA seq
DB search
MLFFSFFKTLTNQTVTIELKNDIRIRGTLKSVDQYLNIKLDDVDVLDLDKYPHLSSVKNM
FIRGSVVRYVMLPRSEVDVGLLEDATRREAANQAGKAR
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgcttttcttcagcttctttaagacccttacgaaccaaactgtgacgatcgagctcaag
aatgacattcgcattcgcggaacgttgaaatccgtcgatcaatatctcaacatcaaactc
gatgatgtcgatgtccttgatctggataaatacccccatctgtcgtctgtgaagaacatg
ttcatccgtggtagcgttgtgcgatatgtcatgcttccccgatcagaggttgatgttggt
cttttggaggatgctacaaggagagaggctgcgaaccaagctggaaaagcccggtga
DBGET
integrated database retrieval system
