Aspergillus clavatus: ACLA_083590
Help
Entry
ACLA_083590 CDS
T01148
Name
(RefSeq) CCR4-NOT core complex subunit Not4, putative
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
act
Aspergillus clavatus
Pathway
act03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACLA_083590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
act03000
]
ACLA_083590
03019 Messenger RNA biogenesis [BR:
act03019
]
ACLA_083590
04121 Ubiquitin system [BR:
act04121
]
ACLA_083590
Enzymes [BR:
act01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
ACLA_083590
Transcription factors [BR:
act03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
ACLA_083590
Messenger RNA biogenesis [BR:
act03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
ACLA_083590
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
ACLA_083590
Ubiquitin system [BR:
act04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
ACLA_083590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Baculo_IE-1
zf-RING_2
zf-C3HC4_3
NS3
Motif
Other DBs
NCBI-GeneID:
4700406
NCBI-ProteinID:
XP_001268090
UniProt:
A1CTM7
LinkDB
All DBs
AA seq
1579 aa
AA seq
DB search
MSSRQQIDSVIDDDDEFCPLCIEEFDLSDKNFKPCPCGYQICQFCYNNIKTHSEEGRCPN
CRRVYDESTIQYKVPDADEFKADLALKHRKAAAAKKKEAEKREIEASSRKNLAGVRVVQK
NLVYVIGLNPTIRDENQLLQTLRGRDYFGQYGEIEKIVVSKAKPGGNPNQGIGVYVTYAT
KADAATCIAAVDGSTNGDRVLRAQYGTTKYCSSFLRNEPCNNRNCTFLHETGEDGDSYSR
QDLSSMNTLSSQRPNGVVAGPSHVFPPHVTRSSAQPIPQPISQPLRRQPSRDDAAGSRPL
DGSALPSSASWANKDSAIHRTRRASLAGSSQASQSPRPAHATMEPPVEEVKKIEKPPQER
VPTPVPTDTRPATPQPTALPTPDPVAPFLENILKAVNSPDFRFIFSTADLSTDDATLIEN
HPSFIDPYGGVKRRAMREKAEQERAQREQELLQTVTAEEESRESGSLQLGGEPDDAHPIR
GRGSRESHGAIQPPSQQGTTTNSVVGSPVSATSHQFQTLNLGSRSLTPLQQQQLMLLKSA
SNQQAGLVDPLQNGLTSTALDQATQVRQGLLQSQMAQFNALQAQNRQSSRFSFANEAGAK
NLPNVRMLGQQAGLMQSGTPNPLAAPTPQHGLANSFYTSGVQGPPPGLKTAGTPPISGGG
MFAQGHGFTTNANLGLGGNIGKQEANPELMRELLRGRTGTNTSVLQGQEAAKREFMFPLL
QQHHTPPPLTPANGLLGSFYGPQPGTFSEAGPQKQKKKGKKHRHANTSSGGGGVVDLADP
SILQARMHQVGANAGAGQALYGSQGQGGYNHSMMYGGGFSRCAVRPARFGHGSIFGFLFR
SHLPSDSQGAARAGTPTLPPGLPLPHAHPASALFHSPLNPSSPSPTVPMLPPGLNVTISK
PGTPSQNFSEIGESRQPSPEIKETPENNPSSSRIKNASEISLGSPVPKSAQKARSQFKAE
LTANSDEKKPNVKELDAAGGSSINNNSKPNKKASTKAKPMKLDLHLTPVLPQESLSPKID
SAAPIAALNHVPPPTSAVGSRPNTPMTGISRASDASAPRQPRVLRVVDTPKTETPPLASA
SQSAVSLPAAVKARSRRPSISSLSRPDTPGDLGSEADFYTSASASRANSPPASSRIGSAP
VRAITKSQLKKERRQKAKEAEAKKQEVTSVVVEEPVQAPILGRKRKTKKTPTINTDASST
GTDHTPEPAKASQASVQPTAEKAEGKADEAKKSKPKEKPPKPTVEENPPVVEKKPVEAWR
SKNTVEQMIKDSESSGVPIKDLFSERTSPLQVLLAQLHRSGELDLNNHPLFNPSNLSQRF
DMRCTSDDYEYLKQPIELTEEHRKALLRGEPVRLHSNSGQLKDRCLITPRGCVLHHLSTE
EEDRYLALEKSIGWALDSFQEYPAALITEPDVTNRGGSLDALFATPENFNICWVDEASAS
LSSATHAGSTAAGDASVSSTSSAPPNVLSTMEADSTRSHNWAIASTAELANATAASVRSF
AAATAKHMLGAAGVVMGTIPDLDDVVGMTDEELRSFALKSQKELEGSRKELDAIDKKLAA
LFKRNKKLAQQALTTTVEV
NT seq
4740 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcgccagcaaatagactctgtcatcgatgacgacgatgagttctgcccactc
tgtatcgaagagtttgatctgtcggacaagaacttcaaaccgtgcccttgtggatatcag
atttgtcagttctgttacaacaatatcaagactcatagcgaggagggccggtgtcccaac
tgcaggcgcgtttatgacgagagcactatacaatacaaggtgcctgatgcggacgagttc
aaagccgatttggcgttgaaacatcgaaaggctgccgctgcgaagaagaaggaggctgag
aaacgtgaaatcgaagcttccagtcgaaagaacctcgccggggttagagtcgtgcagaaa
aacctggtctatgtgatcggtcttaaccccacaatacgcgacgagaaccagctgcttcag
accctccgtggaagggactatttcggtcagtatggtgagatcgagaagatcgttgtcagc
aaagcaaagccgggtggcaaccccaaccagggtatcggtgtctatgttacatatgcgacc
aaggcggacgctgcgacatgtatcgctgcggtggatggatctaccaatggtgaccgggtc
ctaagggcgcaatacggaacgaccaaatattgctcctccttccttcgcaacgagccgtgc
aacaaccgaaactgtaccttccttcatgagacaggcgaagacggtgatagttatagtcgg
caggatctctcttcgatgaacacactctccagtcagcgtccgaatggtgtcgtcgctggc
cccagccatgtattcccgccccacgtcactcgatcatccgctcaacctattcctcaacct
atttctcaaccgctgcgccggcaaccgagcagggatgatgctgctggcagtcgcccgctg
gatggatccgctcttccctcgtcggccagttgggctaacaaggacagtgctatccaccgc
accagacgcgctagtttagctggcagcagtcaagcctctcagagtcctcgaccggcccat
gccacaatggagccgcctgtggaggaggtgaagaagatcgaaaagcccccgcaggagcga
gttccgacaccagtgccgacagacacgcgccctgcgaccccgcaacctacagcgctgcca
acacccgaccctgtggctcctttcctcgaaaacattctcaaggcggtcaactctccagat
ttcagatttatcttttccactgccgatctctccacagatgatgctacccttatagaaaat
catccgtcgttcattgatccctacggcggcgtcaagcgtcgagcgatgcgggagaaagcg
gaacaagagcgcgcgcaaagagaacaggagctattacaaactgtcacagccgaggaggaa
agtcgcgaaagcggaagcctgcaattgggtggagagccggacgatgctcatccgatccgg
ggtcgaggaagccgggaatcccacggtgcgattcagccaccgtcccagcaaggcactacg
acaaattcagttgttggttcccccgtgtcggccacaagccatcagttccagaccctcaat
ctcggcagccgtagcttgacaccccttcagcaacagcagctgatgctgctcaaatctgcc
agtaaccagcaggctggcctggtagatccgctccagaatggtctcacttcaactgcactt
gatcaggctactcaagtccgacaaggcttgttgcaatcgcaaatggcgcagttcaatgcc
ctgcaggctcagaatcgtcagtcttcccggttctctttcgcgaacgaggctggtgcgaaa
aaccttcccaacgtcaggatgctaggccagcaggctggtttgatgcagtccgggacgccc
aaccctttggccgcgcctacccctcagcatgggcttgccaacagtttctacacgagtgga
gtgcagggcccaccacccgggctcaagaccgcaggcactccccccatcagcggcggtggc
atgtttgcccaaggccatgggtttaccacgaatgccaatctcggcctgggaggcaatatc
ggaaagcaggaagcgaatccggagttgatgcgtgagctgctccgtggtcggactggcaca
aacaccagtgtattgcaagggcaggaagccgctaagcgtgagttcatgtttcctttactc
caacagcaccacactccccctcccctgactcctgccaatggccttctcggctctttctat
ggccctcaaccggggactttctccgaagctgggccacagaagcagaagaagaaggggaag
aagcacagacatgctaacacttcctccggtggaggcggtgtagtagatcttgcggacccg
agtatcttgcaggcgagaatgcaccaggtgggtgcgaatgccggagctgggcaagcgctg
tatgggagtcagggtcaaggtgggtacaatcactccatgatgtatggaggcggctttagc
cgctgcgccgtgaggcccgctcggtttggccatggttccatttttggcttcctcttccga
tctcaccttcccagtgattctcaaggcgctgctcgcgcaggaactccgacacttccacca
ggtcttcctctgcctcacgctcatcctgcgtcagccttgtttcacagcccgttgaatccg
tccagcccgtcgccgacggtcccaatgctgcctcctggactcaatgtcaccatttccaag
cccggaacaccatcccagaacttctctgagataggggaatcccgtcaaccatccccagaa
atcaaagaaactccagaaaataatccatcctcaagcagaatcaagaacgcttccgaaatt
tcgctgggttcacccgtgcccaagtccgcccaaaaagctcggtcgcagttcaaagccgag
ttaacagcgaattctgatgagaagaaacccaatgtgaaagaactagatgccgccggcggc
agcagcatcaacaacaacagcaaaccaaacaaaaaagcatctacaaaggctaaaccgatg
aagcttgatctacatctgacaccggttctgccccaggaatccttgtctccaaagatcgac
tctgcagctccaatcgctgcgctcaaccatgtcccacctccaacttccgccgtcggatcg
cgtcccaatactcctatgacgggaatatcgcgcgcatctgatgcatccgctcctcgtcaa
cctcgagtgctccgtgtggtggacacaccgaaaactgagacaccgcctctcgcttccgct
tcccaatccgcggtgtctttgccagccgcagttaaggcacgctctagacggcccagcatt
tcgtcgctcagtagacccgacactcccggtgacctaggctccgaagccgatttttacacc
tctgcatcagcctcccgtgccaattcacctccggcttcttcccggataggctcagcacct
gtgcgggctattaccaagagtcaactcaaaaaggaacggcgacagaaagcgaaagaggct
gaagctaaaaagcaagaggtcacctcagtcgtcgtggaagagccagttcaagcacccatt
cttggcaggaaacggaaaaccaagaagactccgaccataaatactgatgcgtcgagtacg
ggcacggatcatactcctgaacctgccaaagccagtcaagccagcgtccaaccgactgct
gaaaaggccgaggggaaggctgatgaggcaaagaaaagcaagccaaaggaaaagccgccc
aagcccacagtcgaagagaacccgccagtagtcgagaagaagccagtggaggcatggcgc
tcgaagaacacagtggagcagatgatcaaagactccgaatccagcggggttcccatcaaa
gatctcttttcggagcgaacgtcgccattgcaggttttactggctcagcttcataggtct
ggcgagctggatctgaacaatcaccctttgttcaacccttcgaacctcagtcaacgtttt
gacatgcggtgcacttccgatgactacgaatatttgaagcagcccatcgaacttacagaa
gagcaccgaaaagcgctgctgcgtggggagcccgtgcggctacactccaactccggtcaa
ttaaaggatcgatgcttgatcactccccgtggatgcgtgctccatcatctgtcgacagag
gaagaagataggtatctggccttggaaaaaagcatcggatgggcactggattctttccag
gagtacccggccgcgcttatcaccgagcccgatgtgaccaaccgcggcggcagtctggat
gcactatttgccacgcctgaaaacttcaacatctgctgggtagatgaggcctctgccagt
ctttcatcagcgacacatgctggatctactgcagctggcgatgcatccgtgtcgtccaca
tcttctgctccacccaacgtcctgtccaccatggaagcggacagcacgcgtagccacaac
tgggccattgcaagcactgccgagctggccaacgcgacggctgcctctgtgcgttcattt
gcagctgctactgccaaacacatgctcggagctgcgggtgtggtcatgggaaccatccct
gacctggatgatgtggttggcatgacggatgaggagctccgttcgtttgcgctcaaatct
caaaaggaactggagggatcgcgaaaggagctggatgccatcgataaaaagctcgctgcc
ttgttcaagcggaataagaagcttgcgcagcaggctttgacgacgactgtcgaggtctaa
DBGET
integrated database retrieval system
