Aspergillus clavatus: ACLA_084420
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Entry
ACLA_084420 CDS
T01148
Name
(RefSeq) cleavage and polyadenylylation specificity factor subunit Fip1, putative
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
act
Aspergillus clavatus
Pathway
act03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
ACLA_084420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
act03019
]
ACLA_084420
Messenger RNA biogenesis [BR:
act03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
ACLA_084420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
4700365
NCBI-ProteinID:
XP_001268173
UniProt:
A1CTW0
LinkDB
All DBs
AA seq
320 aa
AA seq
DB search
MMDEDEDDFYDPADAVPVNRTQNTHQNQLDDTSQEVNDGEEEEIEVEEDEDDFNIITEAP
PDAPPPEVPHPRHASLRAEPQRPSSVDSTGISKSVTPTVTPKIEAATPVPASARPAVPQK
PGSAYPPVHASTIDVNANPTHPATGKPIMSTDMDTDFPSEDDKPWRRPGSDVSDYFNYGF
DEFTWASYVLKQQELRKEVGDQKKQLEDMQSFLTMGLPPMPGAPPGAGAPPGSAPPPMPG
MPGIPDMSPDMMQGMLASMMSQGLDPSSMDPMVSLDSVAKAKGPGLEGKVVASLTWAMEA
TIKEADLGAGDEEEDGRVRG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgaagacgaagacgatttctatgatcctgctgatgcggtacccgtgaaccgg
acgcagaatactcatcaaaatcaattagacgatacttcccaagaagtcaatgatggggag
gaggaagagatagaggtggaagaggacgaggatgatttcaacattataacggaagctcct
ccagatgcgcctcccccagaagtaccgcaccctcgtcatgccagtcttcgcgcggaacca
caacggccttcttcggtagactcaacaggaatatcaaagtccgtcacacctacagtaacg
ccgaagattgaagctgccaccccggtacccgccagcgcaagaccagcagtaccccaaaag
cccggctccgcatatccccctgtccacgcgtcgacgatcgacgtaaatgcgaacccaacc
catcctgccacgggtaagccgatcatgtcgacagatatggatactgatttcccgtcggaa
gacgacaaaccatggagacgaccgggctctgacgtctctgactatttcaactacggattc
gacgagtttacctgggcaagctacgttcttaagcagcaagagctgcgcaaagaggtgggg
gatcaaaagaaacaattagaagacatgcaaagcttcttgactatgggcctacctcctatg
ccgggagctcctccaggcgcgggggcacctccaggcagtgcgccaccacctatgccaggc
atgcccggtataccagacatgtctcccgatatgatgcagggcatgctggcgagcatgatg
tcgcaaggtcttgacccgtcatcaatggaccccatggtcagcctggattcggtggccaag
gccaagggcccgggtttggagggcaaggtggtggccagcctcacatgggctatggaggct
acgatcaaagaggcggatttgggggcaggggacgaggaagaagatggtagagtgcgaggt
tga
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