Aspergillus clavatus: ACLA_085130
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Entry
ACLA_085130 CDS
T01148
Name
(RefSeq) nonsense-mediated mRNA decay protein Upf3, putative
KO
K14328
regulator of nonsense transcripts 3
Organism
act
Aspergillus clavatus
Pathway
act03013
Nucleocytoplasmic transport
act03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
ACLA_085130
03015 mRNA surveillance pathway
ACLA_085130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
act03019
]
ACLA_085130
Messenger RNA biogenesis [BR:
act03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
ACLA_085130
mRNA cycle factors
P-body specific factors
ACLA_085130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
RBD_DGKtheta
Motif
Other DBs
NCBI-GeneID:
4699969
NCBI-ProteinID:
XP_001268244
UniProt:
A1CU31
LinkDB
All DBs
AA seq
580 aa
AA seq
DB search
MTQISPGKPTGGVLQIPATATQKNSSSSRKNPKPAAPRLKLLVRRLPPGLTQTEFENALG
SEWAIGAGKVDWYQYKPGKIAKDHAKPSRPSRAYIHVTSSEHIASLSDKVRQTPFIDSRN
TVNDPVLLGPPSLEFSPYAKIPGSRVRKDARQGTIDQDPEFIAFLESLTQPITKPAPVES
AEADEKKETVTTTPLVQYIKEKKASKAKEAASKSSRHAKGDKDSKSEKVQAKRLLQRPDK
DTSQASPEKAEKKPRTADKAAKEAVKAANRAANVTVKQTAKPTSQVASRDASQPASQGER
RRERGNIAAAAKILQRDLGLAPSGARRRGGKGTPTDTEQKKEAEATTEAGKKDTATRSGK
AASPAQPAPAKGRGNAPPQTSEPASSRGQSSPGTPPANAPTAPAKQSKSGRGKQAAAVAS
STATQAFLKHANPSQGVTEPLLETAFSPFGKIVKVEIDKKKGFGYIDFTEPGGLQKAIAA
SPVTVAQSQVVVLERKVNPGAEKGRGKGRSEPPASSAGSTNGNRGKSGGGGEGGSGAATP
SSSRGPRGGRGSRNKGGAKGSGGNAGANANASGGKSSETK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagatttcccctggcaagccaacaggaggtgtcctccagatcccagcgaccgcg
acgcagaagaactcatcgtcctctagaaagaatcccaagccagctgctccgcgactcaaa
ctactagtgagacggctaccgcccggcctgacgcagaccgagttcgagaatgcgctggga
tccgaatgggcgattggtgctgggaaggtggattggtaccaatacaagcctggcaagata
gccaaagatcatgcgaaaccatcgagaccctcccgtgcctacattcacgttacgtccagc
gaacacattgcgtctctttcagataaagtccgacaaaccccattcatagacagccgcaat
accgtcaacgacccggtgctcctagggccgccatcgctcgaattttctccgtacgctaag
atccccggtagtcgggtccgcaaggatgctcgccagggaaccatcgatcaggaccccgag
ttcattgcttttctcgagagccttacacagccgatcacgaaacctgctcccgttgaaagt
gccgaggcagatgaaaagaaggaaacggtgacaacgacgcctctcgtccaatacatcaag
gagaagaaggccagcaaagccaaggaggccgccagtaaatcctcgagacacgccaagggc
gacaaagattccaagtccgaaaaggtgcaagccaagagactcctgcagcgaccggataag
gatacttcccaggcctcgcccgagaaagcagagaagaaacccaggacagccgataaggca
gccaaggaagcggtcaaggcagcaaatagggccgccaacgtcaccgtcaagcaaaccgcc
aagccaacaagccaagtagcgagcagggatgcttcccagcctgcttcgcagggtgagcgg
agaagggagcgtgggaatatcgccgctgcggccaagattttacagagagatctggggctt
gcgccttcaggcgcacgccgcagaggtgggaagggtactccgacagatacagaacagaag
aaggaggcggaggctactacagaggctggcaagaaggataccgcgaccagatctggaaaa
gccgcttcgcctgcccaacccgcgccagcgaagggccgaggaaacgctcctcctcagaca
agcgaacccgcgtcatcccgtggtcagtccagcccaggcacccctcctgccaacgcgccc
acagcaccggccaaacagtcgaaatcggggcgaggaaagcaagccgcagcggtcgcttct
tcgacggctacacaggcattcctcaagcacgccaacccgtctcagggggtcaccgagcca
ttactggaaaccgccttctcaccttttggaaagatcgtgaaggtggagatcgacaagaag
aagggattcgggtacattgattttacagaaccgggtggtctacagaaagccattgcggct
agtcctgtgactgtggcccagagtcaggtcgtggtgcttgaacgcaaggtgaatccgggc
gctgagaaaggccgcgggaagggtcgcagtgagcccccggcctccagtgctggtagcacc
aacggcaaccgaggaaagtctggtggaggtggagaagggggatccggcgcagcaacaccg
tcttcatcgcgaggaccccgcggtggtcgtggatctagaaacaagggtggtgccaagggc
agtgggggaaacgccggtgcgaacgcgaatgcttctggagggaagagctcggagacgaaa
taa
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integrated database retrieval system
