Aspergillus clavatus: ACLA_086710
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Entry
ACLA_086710 CDS
T01148
Name
(RefSeq) nuclear mRNA splicing factor, putative
KO
K12830
splicing factor 3B subunit 3
Organism
act
Aspergillus clavatus
Pathway
act03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACLA_086710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
act03021
]
ACLA_086710
03041 Spliceosome [BR:
act03041
]
ACLA_086710
03036 Chromosome and associated proteins [BR:
act03036
]
ACLA_086710
Transcription machinery [BR:
act03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
ACLA_086710
Spliceosome [BR:
act03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
ACLA_086710
Complex B
ACLA_086710
Complex C
U2 SnRNP specific factors
ACLA_086710
Chromosome and associated proteins [BR:
act03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
ACLA_086710
TFTC complex
ACLA_086710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
4700290
NCBI-ProteinID:
XP_001268396
UniProt:
A1CUI3
LinkDB
All DBs
AA seq
1209 aa
AA seq
DB search
MATTSNMFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPAQGKITPIY
SQDVFGIIRTLAAFRLAGSNKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRR
VVPGQYLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTVVFAMIALD
VGYENPIFAALEVDYSESDQDPTGRAYEESEKVLVYYELDLGLNHVVRKWADPVDRTSNM
LFQVPGGGDGPSGVLVCAEDSVTYRHSNQDAFKVPIPRRSGATENPERKRTIVAGVMHKM
RGAFFFLLQTDDGDLFKVTIDMVEDDNGQLTGEVKRLKIKYFDTVPVASNLLILKSGFLY
VASEGGNHHFYQFEKLGDDDEEIEFSSESYSADPSVPCDPVFFRPRGAENLNLVESLNSL
NPLIDSKIANLNEDDAPQIYAVSGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKL
TRGDEFDAYIILSFANGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPRGI
RHILADRRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGSLAEYDERRQMS
GTVTCLSLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIMS
MADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFRVSVRGQTAV
LALSSRPWLGYCDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSIEKL
DNNMLQESIPLSYTPRRLLKHPEQPLFYVIGSDNNVLSPATRARLIEDSKARNGEADTLP
PEEFGYPRATGHWASCIQVVDPVNAKAVISTIELEENEAAVSMAAVPFSSQDDETFLVVG
TAKDLTVNPPSSAGGFIHIYRFQEDGKELEFIHKTKVEEPPLALLAFQGRLVAGIGSILR
IYDLGMKQLLRKCQAPVVPKTIVGLQTQGSRIIVSDVRESVTYVVYKYQENVLIPFVDDT
VSRWMTSTTMVDYETVAGGDKFGNLWLVRCPKKISEEADEDGSGAHLIHERGYLHGTPNR
LELMIHTYTQDIPTSVHKTQLVAGGRDILVWTGFQGTIGMLVPFMSREDVDFFQNLEMQL
ASQCPPLAGRDHLIYRSYYAPVKGVIDGDLCEMYFLLPNDTKMMIAAELDRSVREIERKI
SDMRTRVAY
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggctaccacttcgaatatgttcatgtattccctgacgatccagcctccgactgcaatc
acacaggctattttgggtcagtttgcaggaactaaggaacagcagatcgtcacggcgtcg
ggctcaaagctcactatccatcgtcctgaccccgcgcaggggaaaatcaccccaatctat
tcccaggatgtctttggtatcattcgtacactagcagcttttcggctggctgggagcaat
aaagattatataatcattggctcagactcgggacgtatcaccatcattgaatatgtgcca
tcccaaaaccggttcaaccggatccatctggagacctttggaaaatctggcgttcgtcgc
gtcgtccctgggcaatacctggcggtagacccgaagggtagagcttgtctgattgcctcg
gtggagaagaacaaacttgtgtatgttctgaatcgcaactcgcaggccgagcttacgatt
tcttcccctctggaagctcataagccgcagacagtggtctttgccatgatcgctctcgat
gtgggctatgagaatcccatctttgctgctctcgaggtggactactctgaatctgatcaa
gatcccactggtcgcgcctatgaagaatctgaaaaggttctcgtgtactacgaacttgat
ctgggtttaaatcatgttgtgcgcaagtgggccgaccctgtggatcgcacttcaaacatg
ctcttccaggttcctggaggcggcgatggtccgagtggtgtcttggtatgtgcggaggat
agcgttacctatcgacactcgaatcaggatgcattcaaagtgccaatccctcgccggagc
ggcgccactgagaaccctgaacggaaacgtacgatagtcgccggtgtcatgcacaagatg
aggggcgctttcttctttctccttcaaaccgatgacggtgacttgttcaaggtcacgatt
gacatggttgaagatgacaatgggcagctgactggtgaagtcaagagattaaagatcaag
tactttgacacagtgccagtcgcgtccaatctcttgatcttgaagagtggcttcctctac
gttgctagtgagggtggaaaccatcacttctatcagtttgagaagctgggagacgatgac
gaggagatcgagttcagtagcgaatcctactcggctgatccatctgttccctgtgatcct
gtcttcttccgacctcgaggcgcggagaacttgaatctcgtcgaatcactcaactcatta
aatcctctgatcgacagcaagattgcaaacctcaatgaggatgacgcaccccagatttat
gctgtttctggtactggcgctcgcagcactttcaggactctcaagcatggcttggaggtc
tctgagattgtggagtcggagcttcccagtgtaccatctgccgtttggacaaccaagctg
actcgcggagacgagtttgacgcctatatcattctttccttcgcaaatggtaccttggtg
ctgagtatcggcgagactgttgaagaagtcactgatactggtttcctctcaaccgcgcct
actttggctgttcaacagctcggcgaggactcgttgattcaagttcacccgagaggtatt
cgtcacatccttgcagatcggcgggtcaatgaatggcctgctccacaacacagatcaatc
gtggcggccgcgacaaacgaacgtcaagttgcggttgccctgagctcaggcgaaatcgtc
tacttcgaaatggacgctgatggctcacttgccgaatatgacgagagacgtcagatgtcg
ggtacagtcacatgtctcagtctgggtgaggtccctgaaggtcgtgtccgaagctccttc
ctcgccgtaggatgtgatgactcgaccgttcgcatcctcagcctagatcccgattctacc
cttgaaaataagtcggttcaagctcttacatcagctccgtcagcgctgaacatcatgtcg
atggctgattccagctctggcggtacaacactgtacctgcacatcggtctttattctggc
gtttatcttcgaactgtcctggacgaagtgactggagaactctctgatactcgtacccga
tttttgggtgctaagccggtcaagctgttccgagtttcagtcaggggacaaactgctgtc
ctcgcgcttagctctcggccttggctgggttattgcgacattcaaacgaaaggtttcatg
ctcaccccacttgattacgtgggccttgaatggggctggaacttttctagcgaacagtgt
gtggaaggaatggttggtatccaaggacagaatcttcggatcttctccattgagaaattg
gacaacaacatgttgcaggaatccattcctctttcctacacaccccgtcgtttgctaaag
cacccagaacagcctctgttctacgttatcggatcggacaataatgttttgtcccccgct
acacgagctcgtttgattgaagattcgaaggcacgcaacggagaagccgataccttacca
ccggaagaattcggatatcctcgagctacaggccattgggcatcttgcatacaagttgtc
gatcccgtgaatgctaaagctgtgatctcgacgattgaacttgaggagaacgaggccgct
gtgagcatggcagccgtacccttctccagtcaggatgacgaaactttcctagtagtagga
acggctaaggatctcactgtaaatcctccttcgtctgccggtggtttcatccatatctac
agatttcaagaagacggaaaggagttggagtttattcacaagacgaaggtcgaagaacct
cctcttgctcttcttgcgttccaaggtcgcctggtcgcaggtattggttcgattcttcga
atctacgaccttggaatgaagcagttgcttcgcaaatgccaggctccggttgtgcccaag
acgatcgttgggcttcaaacacagggcagccggatcatcgtcagcgacgttcgggagagc
gtgacgtatgtagtgtacaagtaccaggagaacgttttgattcccttcgtggatgacact
gtctctcgctggatgacgagcacgacgatggttgactatgagacggttgctggtggtgat
aaattcgggaatctttggctcgtccgctgtcctaaaaagatttcggaggaggcagacgag
gacggttcaggagctcatctgattcatgagcgtggttatctgcatggaacccccaatcgc
ctcgagttgatgatccatacctatacacaagatattccgacgagcgtgcataagactcaa
cttgtcgcgggcggtcgtgatatcctcgtgtggactggattccagggtacgattggaatg
cttgtgcctttcatgagccgtgaagatgtggacttcttccagaacttggagatgcagctc
gcgtcccagtgcccccctctcgctggacgggatcacctaatctatcgcagctattatgcg
ccagtgaagggcgtgattgatggcgacttgtgtgaaatgtatttcttactgcctaatgac
acgaagatgatgattgccgcggaactcgaccgctctgttagggaaattgagcggaagatt
tcggatatgcggaccagggtggcgtactga
DBGET
integrated database retrieval system
