Aspergillus clavatus: ACLA_097850
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Entry
ACLA_097850 CDS
T01148
Name
(RefSeq) ATP dependent RNA helicase (Sub2), putative
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
act
Aspergillus clavatus
Pathway
act03013
Nucleocytoplasmic transport
act03015
mRNA surveillance pathway
act03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACLA_097850
09122 Translation
03013 Nucleocytoplasmic transport
ACLA_097850
03015 mRNA surveillance pathway
ACLA_097850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
act03019
]
ACLA_097850
03041 Spliceosome [BR:
act03041
]
ACLA_097850
Enzymes [BR:
act01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACLA_097850
Messenger RNA biogenesis [BR:
act03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
ACLA_097850
Spliceosome [BR:
act03041
]
Complex C
Other components
EJC/TREX
ACLA_097850
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
ACLA_097850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Ned1_M
Motif
Other DBs
NCBI-GeneID:
4702373
NCBI-ProteinID:
XP_001270270
UniProt:
A1CMQ7
LinkDB
All DBs
AA seq
441 aa
AA seq
DB search
MSHEEDLIDYSDEELQTTDAAATTAAPAANGAQDKKGDLTVSGGRPDKKGSYVGIHSTGF
RDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQL
EPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDVEVLSNKESY
PNIVVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVM
MFSATLSQEIRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSESEKNRKLNELLDSL
EFNQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATD
VFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSNEDDEKVLKEIEK
RFEVALPEYPEGGVDSSTYMA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacgaggaggacctcattgactactccgacgaggagcttcagaccactgacgca
gcagccaccaccgctgcccccgctgcgaatggggcccaggataagaagggcgacttgaca
gtctctggcggccgtcccgataagaagggaagttatgtcggtatccactcgaccggtttc
cgcgactttctgctcaagggagaacttctacgtgccatcaccgattgcggtttcgaacat
ccatcggaggtccagcaagtttgtatccccaccgccattctgaacgttgatgttctctgt
caggccaagtctggtcttggaaagactgctgttttcgtcctgaccactcttcatcaactc
gagcccgtacctggagaatgctcggtcctcgtcatgtgccacactcgcgagttggcttac
cagattaagaacgaatacgccagattcagcaaatatctgcctgacgtcaagaccgctgtt
ttctacggtggtaccccgatccagaaggatgtcgaagtcttgtcgaacaaagagtcatac
cccaacatcgtcgtcggcacgcccggtcgtctcaacgcgttggttcgtgacaagaagctc
tctctccgcaacgtcaaggcattcgtgctggatgagtgtgataagatgcttgatcagatt
gacatgcgccgtgatgtccaggagattttccgcgccacccccgctgataagcaggttatg
atgttcagcgccactttgtcgcaggagatccgtcctatttgcaagaagttcatgaggaat
cctctggaagtctacgtcgatgacgacaccaagcttacgcttcacggcctgcaacaatac
tacatcaagctcagcgaatcggagaagaaccgcaaactgaatgagctcttggatagtctt
gagttcaaccaggtcatcatcttcgtcaagagcacactccgtgcgaatgagctggacaag
ctgttgcgcgagtgcaatttccctagcattgcggtgcactctggtgtcagccaagaggag
cgtatcaaacggtacaaagagttcaaggaattcaacaagcgtatttgcgttgccactgac
gttttcggccgtggtattgatatcgagcgtatcaaccttgctatcaactacgatttgccg
gcggatgccgattcgtatctgcaccgtgttggtcgtgctggtcgttttggtaccaagggt
ctttccatctcctttgtcagcaacgaggatgatgagaaggttcttaaggagattgagaag
cgattcgaagttgcccttcctgaataccctgaaggcggtgttgactccagcacttacatg
gcatga
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integrated database retrieval system
