Actinoalloteichus sp. AHMU CJ021: C1701_04830
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Entry
C1701_04830 CDS
T05306
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
acta
Actinoalloteichus sp. AHMU CJ021
Pathway
acta02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
acta00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C1701_04830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acta03021
]
C1701_04830
Transcription machinery [BR:
acta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C1701_04830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AUS81483
LinkDB
All DBs
Position
1219817..1221199
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AA seq
460 aa
AA seq
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MIDRRERAYVAAANTATRRSSSVAAGGAKSTTATPAQAAAKLDAETPAKKPASPRKTSAK
KPAAKGRGRKSEKGTAGKSQTKAKKGLELDEAVELEAAAPGSDDLADVAVDLTEETLAET
DTQEEEAAKASGDFVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVE
LAKRIEAGLYAAERVRKAEDEGEKLSPQLGRDLRWIVRDGERAKSHLLEANLRLVVSLAK
RYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRI
PVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIG
DEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLATLSEREAGVVRLRFGLTDGQPRT
LDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatcgtcgcgaaagggcgtacgtggcagccgcaaacacagcaacccgacgctcc
agctccgtcgccgcgggcggcgccaagtcgacgacggccaccccggctcaggcggccgcc
aaacttgacgcagagacacccgcgaagaaaccggcctcgccgcggaagacctccgccaag
aagccggcggccaagggccggggcaggaagagcgagaagggcacggcgggcaagtctcag
accaaggccaagaagggcctcgagttggacgaggcggtggagctggaggccgccgccccc
ggttccgacgacctcgccgacgtcgcggtcgacctgaccgaggagacgctggccgagacg
gacacgcaggaggaggaagccgccaaggctagtggcgacttcgtctgggacgaggaggag
tcggaggcgctccgccaggcgcgcaaggacgcggagctgaccgcgtcggccgactccgtc
cgggcctacctgaagcagatcggcaaggtggccctgctcaacgccgaggaggaggtggag
ctcgccaagcggatcgaggcgggtctctacgccgccgaacgcgtccgcaaggccgaggac
gagggcgagaagctctccccccagctcggccgggacctgcggtggatcgtccgggacggc
gagcgggccaagagccacctgctggaggcgaacctccgactcgtggtcagcctggccaag
cgctacacgggccgcggcatggcgttcctggacctcatccaggagggcaacctcggcctg
atccgcgccgtcgagaagttcgactacaccaagggctacaagttctccacctacgcgacc
tggtggatccgccaggccatcacccgtgcgatggccgaccaggcgaggaccatccggatt
ccggtccacatggtggaggtcatcaacaagctcggtcgcatccagcgtgagctgctccag
gacctgggccgcgagcccactcccgaggagctcgcgaaggagatggacatcaccccggag
aaggtgctggagatccagcagtacgcccgggagcccatctcgctcgaccagacgatcggt
gacgagggcgactcccagctcggtgacttcatcgaggactcggaggccgtggtggcggtg
gacgccgtgtcgttcacccttctccaggaccagctccagtcggtgctggccaccctgtcc
gagcgggaggccggcgtcgtgcggctccgcttcgggctcaccgacggccagccgcgcacc
ctggacgagatcggccaggtgtacggcgtgaccagggaacggattcggcagatcgagtcc
aagacgatgtcgaagctccgccacccctctcgctcccaggtcctgcgggactacctggac
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