Actinoalloteichus sp. AHMU CJ021: C1701_09585
Help
Entry
C1701_09585 CDS
T05306
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acta
Actinoalloteichus sp. AHMU CJ021
Brite
KEGG Orthology (KO) [BR:
acta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acta03032
]
C1701_09585 (topA)
03400 DNA repair and recombination proteins [BR:
acta03400
]
C1701_09585 (topA)
Enzymes [BR:
acta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C1701_09585 (topA)
DNA replication proteins [BR:
acta03032
]
Prokaryotic type
DNA Topoisomerases
C1701_09585 (topA)
DNA repair and recombination proteins [BR:
acta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C1701_09585 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
AUS78580
LinkDB
All DBs
Position
complement(2294992..2297721)
Genome browser
AA seq
909 aa
AA seq
DB search
MAGSTRAKKGGGSRSGGSGGRRLVIVESPAKARKISSYLGRGFVVESSRGHIRDLPRGAA
DVPARYKSEPWARLGVNVEHDFEPLYVVTPDKKSTVSELKDALKDVDELYLATDGDREGE
AIAWHLLETLKPKVPVRRMVFHEITEPAIRAAAANPRDLDHSLVDAQETRRILDRLYGYE
VSPVLWKKVMPKLSAGRVQSVATRIVVERERERMAFVSADYWNIAAVLDGGPEAQPRTFQ
ARLVNVDGDRLATGRDFGPDGRIRSGEVRVLAEDEARQLARGLDGAELTVSSVEEKPYTR
RPYAPFMTSTLQQEAGRKLRFSAERTMRTAQRLYENGYITYMRTDSTTLSDTAITAARSQ
AAELYGDRYLSPQPRQYTRKVKNAQEAHEAIRPAGEVFRTPGEVAGELETDEFRLYELIW
QRTIASQMADARGTTLSVRISGTARDGERCVFAASGRTITFAGFLKAYVESVDSEAGGEA
DDAERRLPVLTEDQRVTASSLDPEGHSTNPPPRFTEASLVKALEELGIGRPSTYASIIST
IQDRGYVWRRGSALVPSWVAFAVVGLLERHFGRLVDYDFTAGLEDELDGIAAGRQERTAW
LSDFYFGGDIGPSGSVGRAGGLKKLVGSGVEHIDAREINSIPMFTDADGRTVTVRVGRYG
PYLEREAAPDAAGGEGAQRANLPEDLPPDELNPEIAEKLFATPMEGRSLGTDPDTGREII
AKEGRYGPYVTEVLGEDEKGKPRTGSLFKSMSLDTITLADALRLLSLPRVVGRDPETDTD
ITAQNGRYGPYLKRGTDSRSLDSEAQLFDITLEEALRIYAEPKKRGRRTAAAAPPLRELG
SDPASGKPMVVKDGRFGPYVTDGETNASLRKADAVETLTDERAAELLAERRAKGTTPKRG
RKRATSSKS
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
gtggcagggtcgacacgggcgaagaagggcggcgggagccgttcggggggctccggcggt
cgtcggctggtgatcgtcgagtcgcccgccaaggcacgcaagatctcctcgtacctgggg
cgtggattcgtcgtcgagtcctcccgggggcacatcagggacctcccccggggagcggcc
gacgtaccggccaggtacaagagcgagccgtgggcccgcctcggcgtgaacgtcgaacac
gatttcgaaccgctctacgtcgtcacccccgacaagaagtcgaccgtcagcgagttgaag
gacgccctcaaggacgtcgacgagctgtacctggcgacggacggcgaccgcgagggcgag
gccatcgcctggcacctgctggagacgctgaaaccgaaggtgccggtgcgccgcatggtg
ttccacgagatcaccgagcccgccatcagggcggcggcggcgaacccgagggatctggac
cactccctggtggacgcccaggagacccggcgcatcctggaccggctctacggctacgag
gtcagccccgtgctgtggaagaaggtcatgcccaagctgtccgccggccgcgtccaatcg
gtggcgacccgcatcgtggtggaacgcgagcgggagcggatggccttcgtctcggccgac
tactggaacatcgccgccgtcctcgacggcgggcccgaggcacagccccgcaccttccag
gcgcggctggtcaacgtcgacggggacaggctcgccaccggccgggacttcgggccggac
ggccgcatccgctccggcgaggtgcgggtgctggccgaggacgaggcacgccagctcgcc
cgtggtctcgacggcgccgaactgacggtgtccagcgtcgaggagaagccctacacccgc
aggccctacgcgcccttcatgacgtccaccctgcaacaggaggccgggcggaaactccgc
ttctcggcggagcgcaccatgcggaccgcgcagcgcctgtacgagaacggctacatcacc
tacatgcggaccgactcgacgaccctgtcggacaccgccatcacggcggcgcgttcccag
gcggcggagctgtacggcgaccggtacctgtcaccccagccccgccagtacacgcggaag
gtcaagaacgcgcaggaggcccacgaggcgatccgccccgccggtgaggtgttccgcact
ccgggcgaggtcgcgggggagttggagaccgacgagttccggctctacgagctgatctgg
cagcggaccatcgcctcgcagatggccgacgccaggggcacgacgctgagcgtgcggatc
agcgggaccgcgcgtgacggcgagcggtgcgtgttcgcggcgtccgggcggacgatcacc
ttcgccggtttcctcaaggcctacgtggagtcggtggattcggaggccggtggcgaggcg
gacgacgccgagcgccgactgccggtgctcaccgaggaccagcgggtcaccgcctcctcc
ctcgacccggagggtcactccaccaacccgccgccccggttcaccgaggcaagcctggtc
aaggcgctggaggagctcgggatcggccgcccctccacctacgcctccatcatcagcacc
atccaggaccgggggtacgtctggcgccggggctcggccctggtgccgtcctgggtggcc
ttcgccgtcgtgggactgctcgaacggcacttcggtcgcctcgtcgactacgacttcacc
gccggcctcgaggacgagctcgacgggatcgccgcgggccgccaggaacgcacggcgtgg
ttgtcggacttctacttcgggggtgacatcggcccgagcggatcggtgggccgagcgggc
gggctgaagaagttggtcggctccggcgtcgagcacatcgacgccagggagatcaactcc
atccccatgttcaccgacgccgacgggaggaccgtcaccgtacgggtcggccgttacggc
ccctacctcgagcgggaggcggcgcccgacgcggccgggggggagggcgcccagcgcgcc
aacctgcccgaggacctgccgccggacgagttgaaccccgagatcgccgagaagctgttc
gccactccgatggaagggcgttcgctgggcaccgatccggacaccgggcgcgagatcatc
gccaaggagggccgctacgggccctacgtcaccgaggtcctcggtgaggacgagaagggc
aagcccaggacgggatcgttgttcaagtcgatgtcgctggacacgatcacgctcgccgac
gccctgcggctgctgtccctgccccgcgtcgtcggacgggatccggagaccgacaccgac
atcaccgcgcagaacggcaggtacggcccgtacctcaagaggggaacggactcccgttcg
ctcgactccgaggcgcagctcttcgacatcaccctcgaggaggccctgcgcatctacgcg
gagcccaagaagcgggggaggcgcacggccgccgccgccccgccgctgcgtgagctgggc
tccgaccccgcctccggcaagccgatggtcgtcaaggacggcaggttcggcccctacgtg
accgacggtgagaccaacgcctcgctgcgcaaggccgacgcggtcgagaccctgaccgac
gaacgagccgccgaactgctggcggagcggagggcgaagggcaccaccccgaagcggggc
cggaagcgcgcgacgtccagcaagtcctga
DBGET
integrated database retrieval system
