Actinoalloteichus sp. AHMU CJ021: C1701_10530
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Entry
C1701_10530 CDS
T05306
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
acta
Actinoalloteichus sp. AHMU CJ021
Pathway
acta03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C1701_10530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acta03400
]
C1701_10530
Enzymes [BR:
acta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C1701_10530
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C1701_10530
DNA repair and recombination proteins [BR:
acta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C1701_10530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AUS78730
LinkDB
All DBs
Position
complement(2495248..2496111)
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVEAIAHHLRQHAVGRTVRRVDVASPTVLKTVEPTWSALVGREVSGVDRHGKFLD
VRCSGLSLVAHLARAGWLRWQDVLPAAPPRPGRGPLALRAHLGNPGEGPGFDLTEAGTRK
GLAVWIVTDPLEVPGIATLGPDALDLGEEELTELLAGRTERVKTVLTRQSLLAGIGNAYS
DEILHRARLSPFAVAGRLSGDEVARLSRSMREVLADAVRRTEGQEVARLKGEKRAGMRVH
GRTGLPCPVCGDQIREVSYSDRSLQYCPTCQTGGRPLADRRLSRLLR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctacccgaggtcgaggcgatcgcccaccacctccgccagcacgcggtcggc
cgcaccgtgcggcgggtcgacgtcgcctcccccacggtcctcaagaccgtcgaaccgacc
tggtccgcgctcgtcggacgtgaggtcagcggggtggaccggcacgggaagttcctcgac
gtgcgctgctcggggctgagcctggtcgcgcacctggccagggcgggctggctgcggtgg
caggacgtgctgccggcggcgccgccccggcccggtcgcggtccgctggccctccgggcg
cacctcgggaacccgggggaggggccgggtttcgacctcaccgaggcgggcaccaggaag
ggcctcgcggtgtggatcgtgaccgatccgctcgaggtgccggggatcgccacgctggga
ccggatgccctggacctcggagaggaggagctcaccgaactcctggccggtcgcaccgaa
cgcgtcaagaccgtgctgaccaggcagtcgctgctggccgggatcggcaacgcctactcg
gacgagatcctgcaccgcgcgcggctgtccccgttcgccgtggcgggccggctgtccggc
gacgaggtggcccggctgagccggtcgatgcgggaggtgctggccgacgcggtgcggcgc
accgaggggcaggaggtggcccggctcaagggcgagaagcgcgccggcatgcgggtgcac
ggacggacgggcctgccctgcccggtgtgcggcgaccagatccgcgaggtctcctacagc
gaccgttcgttgcagtactgcccgacctgccagaccgggggccggccgctggcggaccgc
cggctgtcccgcctgctgcgttga
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