Actimicrobium sp. CCC2.4: RHM62_01560
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Entry
RHM62_01560 CDS
T09612
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
actb
Actimicrobium sp. CCC2.4
Pathway
actb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RHM62_01560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actb03400
]
RHM62_01560
Enzymes [BR:
actb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RHM62_01560
DNA repair and recombination proteins [BR:
actb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RHM62_01560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
HypA
AAA_30
Zn_ribbon_6
Acc5b_avian_CoV
DUF7130
DUF5817
Motif
Other DBs
NCBI-ProteinID:
WPX32561
LinkDB
All DBs
Position
complement(326025..328064)
Genome browser
AA seq
679 aa
AA seq
DB search
MSHCILTVALDAPLAVGFDYLWPLEVDSTVLPAIGQIAIVPFGRREVAAMIVGIGSTTEV
PAGKLKNALAVHAQLPPLSSSWLALCRFAAAYYHRPLGEVVIPALPKNLRGLKSVSLDKA
LKKLDQPRLAHDATPANVPALNPAQQYAADAIAGASGYAPHLLYGVTGSGKTEVYLHAAA
TILSQASDLDNPAQILIMVPEINLTPQLEGNIRARFPTVMVVTLHSGLAEGERLRNWLAA
HLGHARIILGTRLALLASIPHLKLIMIDEEHDTSYKQQEGLRYSARDLAVWRARQLAIPL
VLGSATPSLETWHHAQSGRYRQLDLRDRAVRDAVLPKVSLINMEHDKPFEGITSTLLKAL
KVRLERGEQSLLFLNRRGYAPVLSCDACGWISNCTRCTAFMVLHKPDYRLRCHHCGLEHR
IPKSCPTCGNVDIQPLGRGTQRVEEGLQSLLPEARLLRIDADSTRRKGSAQAAFDSVHRG
DVDILIGTQMVAKGHDFQNLTLVGILNPDTALFSQDYRASERLFAQLMQVAGRAGRAAQK
DGGSPSEVLIQTRYPQHPLYAAIIAHNYDRFANELLAERRQAGLPPYIFQALLRAEAREL
PIALEFLRAAAAAVKQDGIVINDPIPMTMMRVANVDRAQLLIESASRPALQAFLTVWIAA
LREIKTRARWSVEVDPADI
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
gtgtcacattgcatcctaaccgtcgcacttgacgcaccgctcgctgttggttttgactac
ctctggcctttggaagtggacagcacggtgttgccggcgatcgggcaaattgcgattgtt
ccgttcgggcgccgcgaagtcgctgccatgattgtcgggattggctccacaacggaggtt
cctgccggcaagctcaagaacgcattggccgtgcatgcgcaattgccgccattgagttcg
tcgtggctggccttgtgccgtttcgctgccgcttattaccatcggccgcttggcgaagtg
gtgatcccggcgttgcccaaaaatttgcgcggactgaagtcggtttcgctggacaaggcg
cttaaaaagcttgatcagcctcgccttgctcatgatgcgacgcccgccaacgtgccggcg
ctcaatccggcgcagcaatatgctgctgacgctattgccggtgcctcagggtatgcgccg
catctgttgtacggggttaccggcagcggtaaaaccgaggtctacctgcatgcggccgcg
actatcctcagccaggccagtgatctggacaatccggcacagatactgatcatggtgccc
gagatcaatctgacgccgcagctagaaggtaatatccgcgcgcgttttccaacggtgatg
gtggtgacattgcatagcggcctggcagagggcgaacgcttgcgcaactggctggcagcc
catctgggacatgcacgcatcattcttggtacccggctggcgctactggcatcgatcccg
catctgaaactgatcatgattgacgaagaacatgatacttcttacaagcaacaggaaggg
ttgcgctattcggcacgtgatctggcggtatggcgtgcgcgtcaattggcaatcccgctg
gtactgggctccgccactccctcgctggagacctggcaccacgcgcagtcggggcgatac
cgccagctcgatctgcgcgaccgggccgtgcgcgatgcggtcttgcctaaagtcagtttg
atcaacatggagcatgacaagccatttgaaggcatcacgtcgactttgctgaaggcgctc
aaagtgcggcttgaacgcggcgagcaatccttgctatttctgaaccggcgcgggtatgcc
ccggtactgtcctgcgatgcctgcggctggatcagtaattgcacccgttgtaccgccttc
atggtcctgcataaacccgactaccggctgcgatgccatcactgtggcctcgaacaccgg
attcccaaatcctgtccgacatgcggcaatgttgatatccaaccgctcgggcgcggcacc
cagcgggtcgaggaggggctgcaaagtctgttgccggaagcccggctgctgcgcatcgat
gccgattcaacgcgccgcaagggcagtgcgcaggccgctttcgacagcgtgcatcgcggc
gacgtcgatatcctgattggtacccagatggtggccaagggacacgacttccagaacctg
acgctggtaggcatcctcaatcccgacacggcgctgttttcgcaggattaccgggcgagc
gagcgactgttcgcgcaactgatgcaagtggcagggcgggcggggcgggcggcgcaaaaa
gacggcggtagtcccagcgaagtattgatccagacgcgctacccgcagcatccgctctat
gccgcgatcatcgcgcacaactacgaccgttttgctaacgaattgctggcagagcgccga
caagcggggctgccaccgtacatctttcaagccttgctgcgcgccgaagcccgcgaactc
cccatcgcgctggaatttttgcgcgcggcggcagcagcggtaaagcaggacggcatcgtt
atcaacgaccctattccgatgacaatgatgcgcgtggccaacgtcgatcgggcccagttg
ctgatcgagtcagcgtcccgccctgcattgcaggcatttctgacggtatggatagcggca
ctgcgcgagatcaagacacgggcacggtggtcggtcgaagtcgacccggccgatatctga
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