Actimicrobium sp. CCC2.4: RHM62_02400
Help
Entry
RHM62_02400 CDS
T09612
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
actb
Actimicrobium sp. CCC2.4
Pathway
actb00061
Fatty acid biosynthesis
actb00071
Fatty acid degradation
actb01100
Metabolic pathways
actb01212
Fatty acid metabolism
actb02024
Quorum sensing
actb04146
Peroxisome
Module
actb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RHM62_02400
00071 Fatty acid degradation
RHM62_02400
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RHM62_02400
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHM62_02400
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
actb01004
]
RHM62_02400
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
actb04147
]
RHM62_02400
Enzymes [BR:
actb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RHM62_02400
Lipid biosynthesis proteins [BR:
actb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RHM62_02400
Exosome [BR:
actb04147
]
Exosomal proteins
Exosomal proteins of breast milk
RHM62_02400
Exosomal proteins of breast cancer cells
RHM62_02400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WPX32721
LinkDB
All DBs
Position
complement(512934..514907)
Genome browser
AA seq
657 aa
AA seq
DB search
MVETTTKATGTTFPHLLLQHAQQRPHKAAFREKDLGIWQATSWSQVAAEVRALACGLAAI
GFKRGMNLAIIGDNRPRLYWAMSAVQCLGGVPVPLYQDAPAADMAYVLQDAEIDFAVVED
QEQVDKLFEIKQTQPAMADRIHHIIVDDERGLRHYAQPELDSYAKLQEIGRKYDLAHPDF
FMREVNLGQPDDTAIILYTSGTTGKPKGVCHSHAAMIATATNLVEFDQLTEADDVLCYLP
LAWVGDFLYSYGQAHLTGLCLNCPESPETVMTDLREIGPTYYFGPPRVYENILTQVMIRI
EDASWIKRKLFHHFMAVARRVGIPILDGKGSVSLLDRLEYAFGELLIYGPLKNVLGLSRL
RVAYTGGEAIGPDLFDFYRSLGINLKQLYGMTETCVSVCMQRSGDVKLDTVGKPMKGVEI
KLSDSGEVLVRSRGLMTGYFKRPDATAEAIDADGFFLTGDAGFFDADGHLKIIDRAKDVG
KMADGAMFAPKYIENKLKFFPYIKEAVAFGDQRTQCNAFINIDMAAVGNWAERRGLAYSG
YTDLAALPAVNDLIAECIAKVNADLVHDPLLAGSQVHRFMILHKELDPDDDELTRTRKVR
RGFIAEKYAVLIDALYSDKTSQYIETQVKFEDGRKGMVAADLQIRSAKIVAALPRAA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggtggagacaacaaccaaggcgacgggaacgacgttcccgcacctgctcttgcaacac
gcgcagcaacggccgcacaaggccgccttccgcgaaaaagacctcggtatctggcaagcc
acaagctggtcgcaagtcgccgccgaagtccgtgcgctggcctgcgggctggcggcgatc
ggcttcaagcgcggcatgaatctggccatcatcggcgacaaccggccgcgtctgtactgg
gcgatgtcggcagtccaatgcctgggcggcgtgccggtgccgctgtatcaggatgcgccg
gcggccgacatggcctacgtgctgcaggatgccgagatcgacttcgccgtggtcgaagac
caggagcaggtcgacaagctcttcgagatcaagcagacccagccggcaatggccgaccgg
atccatcacatcatcgtcgatgacgaacgcggcctgcgccattacgcccagcccgagctc
gacagctacgccaagctgcaggaaatcggccgcaagtacgacctcgcccatcccgatttt
ttcatgcgcgaagtcaatctcggccagcccgacgacaccgccatcatcctgtacacctcg
ggcaccaccggcaagccgaagggcgtctgccattcgcatgcagcgatgatcgccaccgct
accaacctggtcgagttcgaccagctaaccgaagccgatgacgtgctctgttatctgccg
ctggcgtgggtcggcgactttttgtactcgtatgggcaagcgcatctgacgggcctgtgc
ctgaactgcccggagtcgccggagacggttatgaccgacctgcgcgaaatcggcccgacc
tattatttcggtccgccgcgcgtctatgaaaacatcctcacgcaagtgatgatccgcatc
gaagacgccagctggatcaagcgcaagctattccatcatttcatggccgtggcacggcgt
gtcggcattcctatccttgatggcaaaggcagcgtcagcctgctcgaccggctcgaatac
gcgttcggcgaactgctcatttatggtccgctgaaaaacgtgctgggcctgtcgcgcctg
cgcgtggcctacaccggcggcgaagcgatcgggcccgacctgttcgacttctatcgttcg
ctcggcatcaacctcaagcagctgtatggcatgaccgaaacctgcgtgtcggtctgcatg
cagcgttccggcgacgtcaagctcgacacggtcggcaagccgatgaagggcgtcgagatc
aagctcagcgacagcggcgaagtactggtgcgttcgcgcggcctgatgaccggctacttc
aagcgccccgatgcgaccgccgaagcgatcgatgccgatggctttttcctcactggcgac
gccggcttcttcgatgccgatggccacctgaagatcatcgaccgcgccaaggatgtcggc
aagatggccgatggcgcgatgttcgcgccgaagtacatcgagaacaaactgaagttcttc
ccgtacatcaaggaagccgtggctttcggcgaccagcgcacgcagtgcaatgccttcatc
aacatcgacatggcagcggtgggcaactgggccgaacgacgcggcctggcctacagcggc
tacaccgacctggctgcgctgccggcggtcaatgacctgatcgccgaatgcatcgccaag
gtcaatgccgacctggtgcacgacccgctgctggccggctcacaagtccatcgcttcatg
atcctgcacaaggaactcgatccggatgacgacgaactgacccgcacccgcaaggtccgg
cgcggtttcattgccgaaaaatacgcggtgctgatcgacgcgctgtactcggacaagacc
tcgcaatacatcgaaacccaggtcaagttcgaagatggccgcaagggcatggtcgccgcc
gacctgcaaattcgcagcgcaaaaattgtcgccgctctcccgcgcgcagcctga
DBGET
integrated database retrieval system