Actimicrobium sp. CCC2.4: RHM62_03165
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Entry
RHM62_03165 CDS
T09612
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
actb
Actimicrobium sp. CCC2.4
Pathway
actb00300
Lysine biosynthesis
actb00470
D-Amino acid metabolism
actb01100
Metabolic pathways
actb01110
Biosynthesis of secondary metabolites
actb01120
Microbial metabolism in diverse environments
actb01230
Biosynthesis of amino acids
Module
actb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RHM62_03165 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RHM62_03165 (dapF)
Enzymes [BR:
actb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RHM62_03165 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WPX32865
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Position
complement(668479..669336)
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AA seq
285 aa
AA seq
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MKIKFTKMHGAGNDFIVIDAINQTIKLTPAQWRQLADRRFGIGADQILVVEASENTDIDF
RYRIFNADGGEVEQCGNGARAFVRFVTEKKLTAKSVLRVATMNGVIVPRLEADGSITVDM
GAPVFIPARVPFDTTGLVGIADADETLWPLQINERTIMMSVLSMGNPHAVQVVESVDTAD
LALDGPAIEHHVRFPNRINAGFMQILDRHAIRLRVFERGAGETLACGTGACAAAVAGIRR
GQLDTPVRVETLGGQLSIAWEGGASHVMLSGPAVTVFEGEITLPD
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaaatttaccaaaatgcacggcgccggcaacgacttcatcgtcatcgatgcg
atcaaccagacaatcaagctgacaccggcgcagtggcggcaactggcggatcgccgcttc
ggtatcggtgctgatcaaatcctggttgttgaagcctccgagaataccgatatcgatttc
agatatcggattttcaatgccgacggcggtgaagtcgagcaatgtggcaacggtgcacgg
gcattcgtccggttcgtgaccgaaaaaaaattaacggcaaaatccgtgctccgcgttgcc
acgatgaatggcgttatcgtgccaaggctggaggctgacggcagcattacggtcgatatg
ggcgcgccggtgttcatccccgcacgcgtcccattcgatacgaccggactcgtgggcatc
gcggatgcagatgaaacactctggccgctgcaaatcaatgagcgcaccatcatgatgtca
gttctatcgatgggcaatccgcatgccgtacaggtcgttgagtctgtcgatacggcggac
ctcgcactcgatggccctgccatcgaacaccatgtccggtttcccaatcgcatcaatgcc
ggcttcatgcaaattctcgaccggcacgcgatccggttacgtgtctttgaacggggagca
ggagaaacgctggcgtgtggcacgggtgcctgcgctgcagcagtggcaggcatccgcaga
ggacagctcgatacgccggtgcgggtagaaacactgggcggccagttgtcgatcgcctgg
gaaggcggcgcatcccatgtgatgctaagcggaccggcagttactgtcttcgaaggcgag
ataacgttaccggactaa
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