Actimicrobium sp. CCC2.4: RHM62_03220
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Entry
RHM62_03220 CDS
T09612
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
actb
Actimicrobium sp. CCC2.4
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
actb01011
]
RHM62_03220
Enzymes [BR:
actb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RHM62_03220
Peptidoglycan biosynthesis and degradation proteins [BR:
actb01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RHM62_03220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Raf1_N
AidB_N
Motif
Other DBs
NCBI-ProteinID:
WPX32874
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Position
680320..682272
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AA seq
650 aa
AA seq
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MFQLKWITGVVFAVASITLIAPVAQAKSRVASFVNDDDIFMALRDAARKDDAAKAAELAD
RLPDYAIPSYVDYYRLKPRLQQASSSEIREYLRRYNGSAIADRLRNDWLLILGQRRDFVT
FDEQYPLFALDDDLQLKCYSLLSRATRGEQVAVAARALLVSPKDYGEACSTLITTLAGAG
QFTPDDLWWQLRAAGETSQVSAARRLAPLLSASDAQIVQSIEKAPLVLARGVGNSALTHQ
LFIVALGRVSRTSPEQAASALSNVESQLSPGERALGWSQIALQASLKLMPEATTLYWSRT
DGAPLTSDGYQWRARMALRNGDWTLIRRAIEAMPPDLRDDGTWIYWRARALGASGDVTEA
QKLFKSIADQTNFYGQLALEDLGQKISIPIPGAPLTAQEIAPLAANPGLRRALKFFDMNL
RFEAVREWNWELRSLSEREHLAAAEFARQNNVLDRMVNTSDRTRSERDFNQRFPSPFRDF
MVTSTNALGLDMAWVYGLIRQESRFIMNARSHVGASGLMQLMPATARYVAKKIGMTSFDP
DQVNEVSTNIALGTNYLNMVLGDLDGSQAMATAAYNAGPGRPRSWRSSLTRQVEGAVFAE
SIPFAETRGYVKNVLSNATYYAALFDGKPQSLKARLGMIAPKGFVASELP
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaattgaaatggatcaccggcgtggtgttcgccgtggcgtcaatcacgctcatt
gctccggtagcacaggccaaaagccgcgtggccagttttgtcaacgatgacgatattttt
atggcactgcgcgatgccgcccgcaaggacgatgctgccaaagccgccgagctggccgac
cgcctgcctgattatgccatcccttcctacgtcgattattaccgcctgaagccacgcctg
cagcaggcgtcctcgtcggaaatccgcgaatacctgcgccgctacaacggcagtgcgatc
gccgaccgtttgcgcaatgactggttgctgatccttggccagcgacgtgatttcgtcacg
tttgacgaacaatacccgctgttcgccctcgacgatgacctgcaactgaaatgttattca
ttgctgtcgcgcgcgacccgtggcgagcaggtggcggtggctgcacgggccttgctggtg
tcgcccaaggattacggcgaagcctgttcgacgctcatcaccacgctagcaggggccggg
cagttcacccccgatgatctgtggtggcagttacgcgcggccggtgaaaccagtcaggtc
agcgcggcccgccgcctggctccattgttgtcggcaagcgatgcccagatcgtccagtcc
atcgaaaaagcaccactggtcctagcacgcggcgtcggcaattcggcgctgacgcatcag
ttattcatcgttgcgctgggccgcgtgtcacggaccagtcccgagcaggcggccagcgcc
ttgagcaacgtcgagtcacaactgagcccgggcgagcgtgcgctgggctggtcgcagatt
gccttgcaggcttcgctcaagctgatgccggaagccaccacgctctactggagccgcacc
gatggcgcgccattgaccagcgatggctaccagtggcgcgcgcgcatggctttgcgcaat
ggtgactggacactgatccgccgcgccatcgaggcgatgccccccgacttgcgtgacgac
ggcacctggatttactggcgtgcccgtgcgctgggtgccagcggtgatgtcaccgaggcg
cagaagctcttcaagtcaattgccgaccagaccaacttctatggccagctggcgctcgaa
gacctgggccagaaaatcagtatcccgatccctggcgcacccttgaccgcacaggaaatc
gcaccgctggcagccaacccgggcctgcgccgtgcgctcaaattcttcgacatgaactta
cgctttgaagcggtgcgcgagtggaactgggaattgcgcagcctgagcgagcgcgaacat
ctggccgccgccgaattcgcgcgccagaacaacgtgctcgaccggatggtcaacacctcc
gaccggaccaggtcggaacgcgatttcaaccagcgcttcccgtcgccatttcgcgatttc
atggtcaccagtaccaacgcgctgggtctggacatggcctgggtctatggattgatccgg
caggagtcgcgcttcatcatgaatgcccgctcgcatgttggtgcctcggggctgatgcaa
ttgatgccggcaacggcgcgctatgtcgccaaaaaaatcggcatgaccagcttcgatccg
gaccaggtcaatgaggtcagcaccaatattgcactgggtaccaactacctcaacatggta
ctgggcgatctcgacggatcgcaggccatggccaccgctgcctataatgccggcccgggc
cgcccgcgcagctggcgatcctcgctgacacgccaggtcgaaggtgcggtattcgccgaa
tcgatcccgttcgccgaaacgcggggctacgtcaaaaacgtgctatccaacgcgacgtat
tatgcggccctgttcgacggcaaaccgcaatcgctgaaagcccggctcggcatgatcgcc
cccaagggtttcgtggcttccgagctgccttga
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