Actimicrobium sp. CCC2.4: RHM62_04965
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Entry
RHM62_04965 CDS
T09612
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
actb
Actimicrobium sp. CCC2.4
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actb03400
]
RHM62_04965
Enzymes [BR:
actb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RHM62_04965
DNA repair and recombination proteins [BR:
actb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RHM62_04965
Prokaryotic type
RHM62_04965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WPX33196
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All DBs
Position
complement(1060724..1062238)
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AA seq
504 aa
AA seq
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MTTASLPDLPYSRSLMWFRRDLRVFDQAALHHALTQSRAVFCVFIFDSDILQHLPGQDRR
IEFLHASLTELHAELVKLGGALIVRHARAVEAIPALALELGVEAVFINHDYEPQAIARDA
TIATALQQHDIALHSSKDQVVFENDEVLSLAGKPFSVFTPYKNAWLRQLQFDSTDVHVRA
HPVEPLADRFAVSAIAHVMPTLAELGFAPSNFAQLNIPTGMSGGQQLVDNFMERIDRYKQ
TRDFPAVKGPSYLSVHLRFGTVSIRHLARRACEAARIAADASGANTWLAELVWRDFYFMI
LQHHPHVVRGAFKPDYDAIQWETGPAADTLFQAWCDGRTGYPLVDAAMAQINQTGYMHNR
LRMVTACFLIKDLGIDWRRGEAYFAEKLIDFDLSANNGGWQWASSSGCDAQPYFRIFNPI
TQSEKFDTDGRFIRRYLPQLAQLGNKQIHAPWLLTKMELDHAGVELGVNYPLPVVQHDVA
RKQTLARYAVVKKVTVTDAESDAD
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgcctccttgcctgacttgccatattcccgctcactgatgtggttccggcgc
gacctgcgcgtgttcgaccaggccgcgctgcatcacgcactgacgcaaagccgcgctgtg
ttttgcgtcttcattttcgacagtgacatcctgcagcacttgcccggacaagaccgccgt
atcgaattcctgcatgccagcctgaccgaattgcacgctgaactggtcaagctcggcggt
gcgctgatcgtgcgtcatgcccgcgcggtcgaggcaattcccgcgctggctcttgaactg
ggcgtcgaggcagtcttcatcaatcacgattacgaaccgcaagcgatcgcacgcgacgcc
accatcgccaccgcgctgcagcagcacgacatcgcgctgcacagtagcaaggaccaggtc
gtcttcgagaacgatgaagtgctgtcgctggccggcaaaccgttctcggtcttcacgccg
tacaaaaatgcctggctcaggcaattgcagttcgatagcaccgatgtgcacgtgcgcgcc
catccggtcgagccgcttgccgaccgcttcgccgtcagtgcgatcgcgcacgtcatgccg
acgctggccgaactcggttttgcaccctctaattttgcacaattgaacatacccactggc
atgtccggaggccagcaactggtcgacaatttcatggagcgcatcgacaggtacaagcag
acccgcgacttccctgccgtcaagggaccgtcgtacctgtcggtgcatttgcgcttcggt
accgtgtcgatccgccatctggcgcgacgcgcttgcgaagcggcgcgtatcgcagccgat
gccagcggcgcgaatacgtggctggccgaactggtctggcgagatttttacttcatgatt
ttgcagcatcatccgcacgtggtgcgcggtgcgttcaagcccgattacgatgcgatccaa
tgggaaaccggtccggctgccgataccctgttccaggcctggtgcgatggtcgcaccggt
tatccgctggtcgacgcggcgatggcgcagatcaaccagaccggctacatgcacaaccgg
ttgcggatggttactgcctgttttttaatcaaggacctcggcatcgactggcgtcgcggc
gaagcctactttgctgaaaaactgatcgacttcgacctgtcggccaacaacggcggctgg
caatgggcctcgtcgtcgggctgtgatgcgcaaccgtatttccgcatcttcaacccgatc
acccagtccgaaaaattcgacaccgacggccgcttcatccgccgctatctgccgcaattg
gcgcaactgggtaacaagcagattcatgcgccgtggctactgacgaagatggagctggat
cacgccggcgtcgaactgggtgtcaattacccgctgccggtggtgcagcatgatgtggcg
cgcaagcagacgctggcgcgctatgcggtggtcaagaaagtgaccgtcacggacgcggaa
tccgacgcagattga
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