Actimicrobium sp. CCC2.4: RHM62_05580
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Entry
RHM62_05580 CDS
T09612
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
actb
Actimicrobium sp. CCC2.4
Pathway
actb00010
Glycolysis / Gluconeogenesis
actb00020
Citrate cycle (TCA cycle)
actb00260
Glycine, serine and threonine metabolism
actb00280
Valine, leucine and isoleucine degradation
actb00310
Lysine degradation
actb00380
Tryptophan metabolism
actb00620
Pyruvate metabolism
actb00630
Glyoxylate and dicarboxylate metabolism
actb00640
Propanoate metabolism
actb00670
One carbon pool by folate
actb00785
Lipoic acid metabolism
actb01100
Metabolic pathways
actb01110
Biosynthesis of secondary metabolites
actb01120
Microbial metabolism in diverse environments
actb01200
Carbon metabolism
actb01210
2-Oxocarboxylic acid metabolism
actb01240
Biosynthesis of cofactors
Module
actb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
actb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
actb_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RHM62_05580 (lpdA)
00020 Citrate cycle (TCA cycle)
RHM62_05580 (lpdA)
00620 Pyruvate metabolism
RHM62_05580 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
RHM62_05580 (lpdA)
00640 Propanoate metabolism
RHM62_05580 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RHM62_05580 (lpdA)
00280 Valine, leucine and isoleucine degradation
RHM62_05580 (lpdA)
00310 Lysine degradation
RHM62_05580 (lpdA)
00380 Tryptophan metabolism
RHM62_05580 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RHM62_05580 (lpdA)
00670 One carbon pool by folate
RHM62_05580 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
actb04147
]
RHM62_05580 (lpdA)
Enzymes [BR:
actb01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
RHM62_05580 (lpdA)
Exosome [BR:
actb04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
RHM62_05580 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
Pyr_redox_3
NAD_binding_8
GIDA
AlaDh_PNT_C
FAD_binding_2
DEC-1_N
HI0933_like
Biotin_lipoyl_2
Thi4
DAO
GCV_H
FAD_binding_3
DUF5525
Motif
Other DBs
NCBI-ProteinID:
WPX33310
LinkDB
All DBs
Position
1203996..1205774
Genome browser
AA seq
592 aa
AA seq
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MSLIEVKVPDIGDFKEVEIIELLVKAGDTIKVDQSLITVESDKASMEIPSSHAGVIKELK
IKVGDKVAMGSLMLVLESAEATEAAPAAAPAPAPAPAPAPAAAAPAPAPAVVAPAATAFA
GKADIECDTLVLGAGPGGYTAAFRAADLGQKVVMIERYATLGGVCLNVGCIPSKALLHAA
KVITDAEEMSHFGIKMSSPEIDLDSLRSWKDGIIKKLTGGLTSLSKARKVQVVEGKGVFS
SANTVTVDTKEGSKVIAFKNAIIAAGSAVSTIPGFPYDDPRVIDSTGALELRQIPKKMLV
IGGGIIGLEMACVYDALGSKITVVEFADGLIPAADRDMVRPLHKRIEKRYDAIYLKTKVT
KLEARDDGLLATFEGDNAPKEPQLFDMVLMAVGRRPNGREVGADKAGVVVNERGFIPVDK
QQRTNVANIFAIGDICGDPMLAHKATNEAKVAAEVIAGHKVQFDAMTIPSVAYTDPEIAW
MGVTETEAKAQNIPFEKVNFPWAASGRALAVGRDEGSTKLLWDPATKRLIGAGIVGVNAG
ELLAELVLAMEMGADLEDIALTIHAHPTLSETPMFAAEMALGTITDLYIPKK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgattgaagtgaaagtccccgacattggcgacttcaaggaagtggaaatcatc
gagttgctggtcaaggccggcgacaccatcaaggtcgaccagtcgttgatcacggtcgag
tccgacaaggccagcatggaaattccatccagccatgccggcgtcatcaaggaattgaaa
atcaaggtcggcgacaaagtcgcaatgggatcgctgatgctggtgctggaatcggcggag
gcgactgaagctgctccggcggcggcacctgcacctgcacctgcacctgcacctgctcct
gctgcagctgccccggcacccgcacccgcagttgtcgcaccggccgctactgcctttgcc
ggcaaggccgacatcgaatgcgacacgctggtcctcggtgccggtcccggcggttatacc
gccgcgttccgcgctgccgatctcggccagaaagtcgtgatgatcgaacgctatgcgacg
ctgggcggggtctgtctgaacgtcggttgcatcccgtcgaaagccttgctgcatgcggcc
aaggtcatcaccgatgccgaagagatgtcgcacttcggcatcaagatgtcgtcgcccgaa
atcgacctcgacagcttgcgcagctggaaagacggcatcatcaagaagctcaccggcgga
ctcaccagcctgtccaaggcccgcaaggtgcaagtcgtcgaaggcaagggcgtgttcagc
tcggccaacaccgtcactgtcgacaccaaggagggcagcaaggtcatcgcattcaagaat
gcgatcatcgcggccggttcggccgtctcgactatcccgggcttcccgtacgacgacccg
cgtgtcatcgattcgaccggcgcgcttgaattacgccagatcccgaagaagatgctggtc
atcggcggcggcatcatcggtctcgaaatggcttgcgtgtatgacgcgctgggcagcaag
atcaccgtcgtcgaattcgccgacggactgattccggccgccgaccgcgacatggtgcgt
ccgctgcacaaacgcatcgaaaaacgctacgacgcgatttatctcaagaccaaggtcacc
aagcttgaagcacgtgacgacggcttgctggccaccttcgaaggcgacaatgccccgaag
gagccgcaactgttcgacatggtattgatggcggtcggtcgccgtccgaatggccgcgaa
gtcggtgccgacaaggccggcgtggtggtcaacgagcgcggctttattccagtcgacaag
cagcagcgcaccaacgtcgccaacatctttgcgatcggcgacatttgcggcgatccgatg
ctggcgcacaaagccaccaacgaagccaaggtcgccgccgaagtgattgccggccacaag
gtccagttcgatgcgatgacgattccatcagtggcctacaccgatccggaaatcgcatgg
atgggcgtgaccgaaaccgaagccaaggcgcagaacatcccgttcgagaaagtcaatttc
ccgtgggcggccagtggtcgcgcgctggcggtgggccgtgacgaggggtcgaccaagctg
ttgtgggatccggctaccaagcgtctgatcggtgccggtatcgtgggcgtcaatgccggc
gaactgctggccgagctggtgctggcgatggagatgggggctgatctggaagacatcgcg
ctgaccattcatgcgcatccgaccttgtcggagacgccgatgttcgctgcagaaatggcg
ctggggacgattacggatttgtatattccgaagaagtaa
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