Actimicrobium sp. CCC2.4: RHM62_08050
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Entry
RHM62_08050 CDS
T09612
Name
(GenBank) PilC/PilY family type IV pilus protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
actb
Actimicrobium sp. CCC2.4
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
actb02044
]
RHM62_08050
02035 Bacterial motility proteins [BR:
actb02035
]
RHM62_08050
Secretion system [BR:
actb02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
RHM62_08050
Bacterial motility proteins [BR:
actb02035
]
Pilus system
Pilus assembly proteins
RHM62_08050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
WPX33759
LinkDB
All DBs
Position
1733909..1738714
Genome browser
AA seq
1601 aa
AA seq
DB search
MSIQTRLIRRPLPLMTSALVVALLLPASTDAAPLALATAPLYTTSAVKPQVMIDMSKDQQ
LFFKAYNDYSDLLGDGVIQTTYTNNVEYYGYFDSAKCYDYSTARGRFEPAAMAVTHYCTG
KWSGNFLNWATMSRMDAVRKLLYGGMRATDGAETVLERSFQPMDAHSWAKYYNGPDLSQL
TPFSVAQDVGTSLQSTSSLEISAGLKSPVTTTTWGDVALGDQVRLTAINRDGTDAAAAAF
MVGWVSSVGDRLQINVPSNGIPSGGSGTYSRWTLTNLTRTGVTLCNVTPNDTTAPNRYSQ
NNSAAPQIRVARGNYALWASNERWQCNWAEEHANTQGESGSSNGNVPLVSGMNSSADNPK
RASRGLNTTVAPSTTGEYIARVQVCVAGLRETEKCKRYPDGTYKPIGLLHTYGDSDSNLM
QFGMMSGSYQKNISGGVLRRNVVDFASEVDGALPTSNGKFSSVKGIVYNMNLLRLYGYDY
GDGTYIANDGCTFQMPGLVQSGGGTNLGDFANEGNCSSWGNPMSEIYLESLRYFAGKSPT
SSYGYPAGSKDDRIGRQGNQTLGLTVETWVDPLTVNNYCSALNTLVFNPSVSSYDGDQMG
GINDLGSTLSAADLTTQIGITEGINGNKWFVGSNAGSASSADGLCTAKTVNGLGLVAGLC
PEGPGTKGTFQIAGAAWYAHTNRIRSRPDPVAAAVPAADTKSLKVTTYGIQLAGSTPKIN
LVVNGKPVVLLPAYRMNAGGRGIYSSGTLVDFKIISQTPTSGSFYVNWEDSSQGGDFDQD
VWGMLNYVISGNTLKITTGIVGASSINGQGFGYVISGTDKDGPHFHSGVYGYSFTDPTNL
TVTPAGSYLNASGGCNACAGSLNPPTTATYQASGEVSFQLQDPLFYAAKWGGFIDGNGNG
KPDNVSEWDTRLSNGRQGSDGIPDNYFYVTNPAALEVSLQRAFQSILLNASSASVASSST
SLNTGAHIYQARFNPSDWSGQLQDFPIDRNGVVAPTPLWDAGAALNGRSPASRVVLSYNG
LPDMLGEGGIAFNWAALPAPYKSALNINSGAINDGRGELRLNWIRGNQTLEGTAFDAFRV
RRTSVLGDIVNSNPQFVGKPDGGYADPDYPGFISTWSARTPMVYVGSNDGMLHGFSATDG
TEKLAFVPSRLMPVLSRLPDQGLAHSYLVDGTPIVRDAKVNGAWKTFLVGGLASGGPSVF
ALDVTDPDSFSEAATKAAAIVQWEFTDAVDADLGFTFGQPSIVKMANGRWAAVFGNGYNN
TSSGNAFLYIVFLDRAAGKKTWTAGVDYLKLATDSAIGSPATPNGLSEPLPVDVDGNGMV
DAVYAGDLRGNMWKFALSNANSSAWGAAQLLYTAKSASGVAQPITSAPDAIRNPAGGYMV
TFGTGRYLQLTDTSDLTPQTFYGIWDPDGVTGATSATDRSVLVRQTMLAEVTASATDFTA
YRLSSNNLVNYPAQKGWYLDLQTPSSPLPQGERVIFNPVIRGGRVIFTTLIPSSTACVFG
GDGWLMELDAVSGSRLAVTPFDVNKDNQFSAADYLKASATSDAIPVSGRRSTIGIPSAPT
ILRAEPKREFKVMSGSKGTVESVLENAAGSSGRLSWREIMR
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atgtccatccaaacccgtctgatccgccggccccttcctctgatgacgtcggctttggtc
gtcgccctgctgctccccgcttcgacggacgccgcgccgctggcgctggcgactgccccg
ctgtacaccacaagtgcggtcaagccgcaagtgatgatcgacatgtcgaaagaccagcag
ctgtttttcaaggcctataacgattattccgatctgcttggcgacggggtgattcagacc
acctataccaataatgtggagtactacggctattttgattcagccaagtgctatgactat
tccaccgcacgcggtcgcttcgaaccggctgcaatggcagtgactcactattgcaccggg
aagtggagcggtaatttcctgaactgggcgacgatgtcacgcatggatgcggtgcgcaaa
ctgctctacggcggtatgcgcgcgaccgatggggcagaaacggtgctcgagcgttcgttc
cagcctatggatgcccattcgtgggccaagtattacaacggccccgacttgtcgcagctg
acgccgttttcggtggcgcaagatgttggcacgtcgctgcaaagtacctcgtcgctggag
atcagcgctggcctgaagtcaccggtgacgacaacaacttggggcgacgtggcgctgggc
gaccaggtgcgactgacggcaataaatcgggatggtaccgacgcggcggccgcggctttc
atggtcggctgggtctcgtcagtaggagatcgcttgcagattaacgtaccgagcaatggc
attccgagtggtggttcgggaacctactcccggtggacactgaccaatctgacgcgaacc
ggcgtgaccttgtgcaatgtgactccgaacgatacaacggctccaaaccggtattcgcaa
aacaatagtgccgcgccgcaaattcgtgttgccagaggcaactacgcattatgggcatcg
aatgagcgctggcaatgcaactgggccgaagagcatgcgaatacgcagggcgagtccggt
tcgtccaacggcaacgtgcctcttgtgtccgggatgaattcatcggcggataatccgaag
cgtgccagccgtggcctgaacacgaccgtggcaccatcgactaccggcgaatacatcgcc
cgcgttcaggtttgcgtagcgggtctgcgcgaaaccgaaaaatgcaagcgctatcccgac
ggtacctacaagccgatcgggttgcttcacacctatggcgatagcgacagtaatttgatg
cagttcggaatgatgagtggcagctaccagaagaatatttcggggggcgtactgcgccgc
aatgtggttgattttgcctcggaggtcgatggggcactgccaacttccaacggcaagttc
agcagcgtcaagggcatcgtctacaacatgaatttgttgcgcttgtatggctacgattat
ggcgatggcacgtatatcgccaatgacggttgtacgtttcagatgcccggcctggtacaa
agcggcggcggtaccaacctgggagatttcgcgaatgagggaaattgctcgagctggggc
aatccgatgtcggaaatttaccttgaatcgctgcgctattttgcaggaaaatcgcccacg
tccagctatggctatccggccggcagcaaggacgacaggattggtcgacagggcaaccag
accttgggcttgaccgttgaaacctgggtcgaccccttgaccgtgaacaattattgctcg
gcattgaatacgctggtcttcaatcccagcgtgtcgtcgtatgacggtgatcagatgggc
ggcataaacgatctgggcagcacgctcagcgcggcagacttgacaacccagatcggtatc
acggaaggcatcaacggcaacaaatggtttgtcggtagtaatgccggcagcgctagtagt
gccgacggtctgtgtacggcgaagacggtcaacgggctgggtctggtggcaggtctctgc
ccggaaggtcccggaaccaaggggacattccagattgccggtgccgcctggtacgcccat
accaaccggatccgctcgaggccggatcccgtcgccgcggccgtgccggctgccgatacg
aagtcgttgaaagtgaccacctacggaatccagctggccggcagtacgccgaagatcaac
cttgttgtcaatggcaagccggtcgttctgctaccggcttaccggatgaacgccgggggc
agaggcatctacagctccggcacccttgtcgatttcaagatcatttcgcagaccccgacc
agtgggtcgttctatgtcaactgggaagactccagtcagggtggtgactttgaccaggat
gtctggggcatgctgaactacgtcatttcgggaaataccctcaagatcaccacggggatc
gtcggtgcctcgtccatcaacgggcagggtttcgggtatgttatttcaggtacggacaag
gatggtccgcattttcactctggtgtctacggctactcgttcacagatccgaccaacctg
acggtgacgccggccggtagctacctcaacgcttccggtggctgcaacgcgtgcgccgga
agcctgaatccacccactacggctacttatcaggcttcgggtgaggtgtcgttccagtta
caagatcccctgttctacgccgcaaaatgggggggctttatcgatggtaatggtaatggc
aagcccgacaatgtatccgaatgggacacccgtctgagcaatggtcggcaaggctcggat
gggattcccgataactatttctatgtcactaatccggctgcactggaggtttcgctgcaa
cgtgctttccagtccattttgctcaatgcctcgtcggcatcggtggccagtagctcgaca
tccctcaataccggtgcgcatatttatcaggcacgtttcaatccgtcggactggtccggg
caattgcaggattttccgatcgatcgaaatggcgtggttgcgccaaccccgctctgggat
gcgggagccgcgttgaatggccggtcgccggcgtcgcgggtggttcttagctataacggc
ttaccggacatgctcggcgaaggtggaattgcgtttaattgggcagctttgccggcaccc
tacaagtcggcgctcaatatcaattccggggcaattaatgatggccggggcgagttgcga
ctgaactggatccgtggcaaccagactctggaaggcacggccttcgacgcgtttcgcgtg
cgtcggacgtccgtgcttggcgatatcgttaactcgaatccgcaattcgtcggcaagcct
gacggcggctacgccgatccggattatccgggtttcatttcgacatggtcagcgcgcaca
ccgatggtctatgtcggcagcaacgatggaatgctccatggattttctgcgacggacggc
accgaaaaattggcatttgtcccatcgcgcctgatgccggtgctgtcgcgattgccggac
cagggactagcccattcctatctggtagacggcacgcccatcgtgcgggatgccaaggtc
aacggggcctggaaaaccttcctggtcggcggtctggccagcggcggacccagcgtgttt
gcgctggacgtcaccgatcccgacagtttcagcgaagctgcgaccaaggcagccgccatc
gtccagtgggaatttaccgacgccgtcgatgcggacctgggcttcacgttcggccagcca
tcgatcgtcaagatggcaaatggtcgctgggctgcggtgttcggcaacggctacaacaac
acctcgagcggcaacgcgtttttatacatcgtcttcctcgaccgtgctgccggtaaaaaa
acctggacggctggtgtcgactacctgaagctggcgacggatagtgcgatcggttcgccg
gccacgccgaacggcttgtcggagccattgccggtcgatgtcgatggcaatggcatggtc
gatgccgtctatgccggcgacctgcgcggcaacatgtggaagtttgcgctcagcaatgcc
aattcatcggcctggggagccgctcagttgctctacacggccaaatcggccagcggcgtc
gcgcagccaatcacctccgcacctgatgcaatacgcaatcctgccggtggctacatggtc
acctttggtaccggccgctatttgcagctcacggataccagtgatttaacaccacagacg
ttttacggtatttgggacccggacggcgtcactggagccacgagtgcgacggatcgctcg
gtactggtcaggcaaaccatgcttgccgaggtcactgccagcgccactgactttaccgcg
tatcgtctgagctccaataacctggtcaattacccggcgcaaaaaggctggtacctcgat
ttgcagacgccgtcatcgccgttgccgcagggggagcgggtcattttcaatccggtaatt
cgcggtggccgggtgatcttcaccaccctgattccgtcgtcgacggcctgtgtcttcggc
ggtgatggctggctgatggagctcgatgcggtcagcggcagccgtctggcggtcacgcct
tttgatgtcaataaggataaccagttttctgccgccgactacctgaaggccagcgccaca
agtgatgccattccggtcagcggcaggcgttcgacgatcgggatcccgtcggcaccgacg
attttgcgggccgagccgaagcgcgaattcaaggtcatgtcggggtcgaaaggcactgtc
gagagcgtgctagaaaacgctgccggttccagtggccgcttgtcgtggcgcgaaatcatg
cgctaa
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