Actimicrobium sp. CCC2.4: RHM62_08255
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Entry
RHM62_08255 CDS
T09612
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
actb
Actimicrobium sp. CCC2.4
Pathway
actb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHM62_08255 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
actb03019
]
RHM62_08255 (pnp)
03016 Transfer RNA biogenesis [BR:
actb03016
]
RHM62_08255 (pnp)
Enzymes [BR:
actb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RHM62_08255 (pnp)
Messenger RNA biogenesis [BR:
actb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RHM62_08255 (pnp)
Transfer RNA biogenesis [BR:
actb03016
]
Prokaryotic type
tRNA degradation factors
RHM62_08255 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
OB_RRP5_4th
S1_RRP5
KH_KhpA-B
DUF5813
Motif
Other DBs
NCBI-ProteinID:
WPX33796
LinkDB
All DBs
Position
1776931..1779072
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AA seq
713 aa
AA seq
DB search
MFNKVTKTFQYGQHQVTLETGEIARQASGAVLVSIEDTVVLATVVARKDAKPGQDFFPLT
VDYVEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPVRPLFPEGYMNEVQIIIHVLSV
NPEIDPDIAAMIGASAALSVSGVPFSGPVGAARVGYINGQYVLNPTTTQLKSSDLDLVVA
GTEAAVLMVESEAKQLSEEVMLGAVVFGHEQMKAVIDAIHELVRDGGKPEIEWAPAAKNE
ALISRVAHFGEAKLRDAYQTKDKQARTAKLKTATSEVMDALKAEAASIAGVAPDSADVNN
ILFDLEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVIAT
LGTARDEQKIDALMGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALLAAL
PPVEEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMQAHVAGIAMGLIKDGGKF
AVLTDILGDEDHLGDMDFKVAGTAKGITALQMDIKIQGITKEIMQVALAQAKEGRMHILD
KMQEAVPIGHTELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV
TIASVDATAGLEAKRRIEELTASVEVGKIYEGTVLKLLDFGAIVQVMPGKDGLLHISQIA
NERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAAASEEGAAAPVAAPAAE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaataaagtaaccaagactttccagtatggccagcatcaagtgacgctggagacc
ggcgagatcgcccgtcaggcttcaggtgccgtcctggtctcgatcgaagataccgtcgtg
ctcgcgaccgtggtcgcccgcaaggatgcgaagccaggtcaggacttctttccgctgacc
gtcgactacgtcgaaaaaacctatgctgccggtcgtatcccgggcggtttcttcaagcgc
gaaggccgtccttccgaaaaagaaaccctgacatcgcgcctgatcgaccgtccggtccgt
ccgctgttccctgaaggctacatgaatgaagtacagatcatcattcatgtgttgtcagtc
aatcctgaaatcgatcctgacatcgcagcgatgatcggtgcatcggccgccttgtcggtc
tccggcgtgccattcagcggcccggtcggcgcggcgcgcgttggctacatcaacggccag
tacgtgctcaacccgaccacgacccagctgaaatcatcggacctcgacctcgtcgttgcc
ggcaccgaagcggccgtcctgatggtcgaatcggaagccaagcagctgtccgaagaagtc
atgctcggcgccgtcgtgttcggtcacgagcaaatgaaagccgtcatcgatgcgatccat
gaactggtgcgcgacggtggcaagccggaaatcgaatgggcacctgctgccaaaaatgaa
gcgctgatttcgcgcgtcgcccatttcggcgaagccaagctgcgtgatgcctaccagacc
aaagacaagcaagcccgtactgccaagctgaagacggccacatcggaagtgatggacgcg
ttgaaggcagaagccgcctcgatcgctggcgttgcaccggacagcgccgatgtcaacaac
atcctgttcgacctcgaagcgaagatcgtccgttcgcagatccttgaaggcgagccgcgc
atcgacggtcgcgatacccgcaccgtgcgtccgatctcgattcgtaccggcgtgctgcca
cgcacccacggttcggccctgttcacccgcggcgaaacgcaagcgctggttatcgccacg
ctgggcaccgcccgtgacgaacagaagatcgatgcgctgatgggtgagtacagcgatcgc
ttcatgcttcattacaatatgcctccgttcgccaccggcgaaaccggccgcgtcggtacc
ccgaagcgtcgtgaaatcggtcacggtcgtctggccaagcgcgcgttgctggcagcactg
ccaccggtcgaagaattcagctattcggtgcgtctggtgtcggaaatcaccgagtccaac
ggttcgtcatcgatggcgtcggtctgcggcggttgcctggcactgatggatgcgggcgtg
ccgatgcaagcacacgttgccggtatcgcgatgggcctgatcaaggatggcggcaagttc
gcggttctgaccgacatcctcggcgacgaagatcacctcggcgacatggacttcaaggta
gccggtaccgccaagggtattactgcgctgcagatggacatcaagatccagggcatcacc
aaggaaatcatgcaagtcgcattggcgcaggccaaagaaggccgcatgcacatcctcgac
aagatgcaggaagccgtcccgatcggtcataccgaactgtcggatttcgcaccgcgcctg
atcacgatcaagatcaacccggaaaaaatccgtgacgtcatcggcaagggcggcgcagtc
attcgcgcgctgaccgaagagaccggcacccagatcgacatcagcgatgaaggcgtcgtc
acgatcgcttccgtcgatgccaccgccggcctcgaagccaagcgccgcatcgaagaactg
accgcgtcggtcgaagttggcaagatctacgaaggcacggtcctgaaactgctcgacttc
ggcgcaatcgtccaggtcatgccaggcaaagatggtttgctgcacatcagccagatcgcc
aacgagcgcgtcaatgcggtcgctgactacctgaaagaaggccagcaagtgcgcgtcaag
gttctcgaaaccgatgaccgcggccgtcttaaactgtcgatgaaagcagccgccagcgaa
gaaggagccgccgctccggtggcagcgccggcagcagaataa
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