Actimicrobium sp. CCC2.4: RHM62_08660
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Entry
RHM62_08660 CDS
T09612
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
actb
Actimicrobium sp. CCC2.4
Pathway
actb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RHM62_08660 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
actb03019
]
RHM62_08660 (rnc)
03009 Ribosome biogenesis [BR:
actb03009
]
RHM62_08660 (rnc)
03036 Chromosome and associated proteins [BR:
actb03036
]
RHM62_08660 (rnc)
Enzymes [BR:
actb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RHM62_08660 (rnc)
Messenger RNA biogenesis [BR:
actb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RHM62_08660 (rnc)
Ribosome biogenesis [BR:
actb03009
]
Eukaryotic type
90S particles
RNase
RHM62_08660 (rnc)
Prokaryotic type
rRNA processing factors
RHM62_08660 (rnc)
Chromosome and associated proteins [BR:
actb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RHM62_08660 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DnaG_cat_HB
Motif
Other DBs
NCBI-ProteinID:
WPX34140
LinkDB
All DBs
Position
1859164..1860099
Genome browser
AA seq
311 aa
AA seq
DB search
MDCMLLEDRLAYWFKDAALLQQALTHRSHSIAHNERLEFLGDSILNCVIASLLYERYSKV
DEGDLSRLRANLVKQQALYEIAQRLEISQFLHLGEGELKSGGFRRPSILADTLEALFGAI
FLDAGFNAARDVIRALYIPILDTVDPKTLGKDAKTLLQEYLQGKKIALPQYNVVATHGAA
HNQEFEIECLVPKLDIQVFGTGGSRRAGEQAAAQCALDALQSTLSKGTASVRKSKPRASQ
LKLTGIATIQGDHAAESVMPDPALSASQAETKKMTSKVVKPALPASTVVVQESITTSETT
TSISVTKSKIA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggattgtatgcttctggaagatcgactcgcttactggtttaaagatgctgccttgttg
cagcaggcgctcacgcatcgcagtcacagcattgcccacaatgaacgcctggaatttttg
ggtgactcgatactgaactgtgtcatcgcgtcgctgctgtacgaacgttacagcaaggtc
gacgagggcgatctttcccgattgcgtgccaatctggtcaagcaacaagcgttgtatgaa
atagcgcagcggctggagatttctcagtttttgcatctcggcgaaggcgaactgaagtca
ggcgggttccggcggccgtccatcctggccgatacgctcgaggcgctgttcggtgccatt
tttctcgatgccgggttcaatgcagcgcgtgatgtgattcgtgcgctctacattccgatt
ctcgacacggtcgacccaaagacattgggtaaagatgccaaaactttgttgcaggaatat
ttgcagggtaaaaagatcgcactgccgcagtacaacgtagtcgccacccatggtgccgcg
cacaaccaggaattcgaaatagagtgtctcgtacccaagctcgatattcaggtcttcggt
acgggaggcagtcgccgggcgggcgagcaagctgccgcgcaatgtgcacttgatgccttg
cagtcaaccttgtctaaagggacggcaagtgttcgcaagagcaagccacgagcgtcgcaa
ttgaagttgaccggcatcgcaaccatccagggcgatcatgcagcggaatcggtgatgccg
gatcctgcgttgtcggctagtcaagccgaaacaaaaaaaatgacgagcaaggtggtcaag
cctgccttgcctgcgtcgaccgttgttgtgcaggagtcgataacgacttctgaaacaacc
acctccatctctgttacgaaatcgaaaatcgcatga
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