Actimicrobium sp. CCC2.4: RHM62_09100
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Entry
RHM62_09100 CDS
T09612
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
actb
Actimicrobium sp. CCC2.4
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
actb03009
]
RHM62_09100 (dbpA)
Enzymes [BR:
actb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
RHM62_09100 (dbpA)
Ribosome biogenesis [BR:
actb03009
]
Prokaryotic type
rRNA helicases
RHM62_09100 (dbpA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
PAS_12
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WPX33944
LinkDB
All DBs
Position
complement(1945822..1947207)
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AA seq
461 aa
AA seq
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MTATPNSFSTLALSPSMLANLDSLGYHEMTPIQAKSLPVILDRRDLIAQAKTGSGKTAAF
GIGILQRLNPTWFAIQALVICPTRELADQVSNELRRLARFADNTKILTLCGGAPMRPQIA
SLEHGAHIIVGTPGRLRDHIGRGSIDLSTVQTLVLDEADRMVDMGFYEEISGIVSACPTR
RQTLLFSATYPDDIRKSSAPFLRDPTEITVEAQHDDNRIEQRFYEVGYDDRNDAVGRLLN
NFKPASALAFCNTKIHCRELADELRAQGFSAMALYGELEQRERDEILVLFANGSCSVLVA
TDVAARGLDIQSLEMVINVDVSKDTEVHIHRVGRTGRGAARGLALSLCAPNEKKWVKLIE
DYQHGPVSWFDLADLEVAPGPALEAPMVTLLIMGGKKDKLRPGDLLGALTGDAGLTKEQV
GKINVFEFMTYVALDRRIAKKAFAKLEGGNIKGRNFKMRFI
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgactgctactcccaactccttttccacgctggcgctctcgccatcgatgctggccaat
ctcgactcgctgggttatcacgagatgacgcccatccaggctaaaagcctgccggtgatt
ctcgaccggcgcgacctgattgcgcaagccaagaccggtagcggcaagaccgctgcgttt
ggcatcggcatcctgcaacgcctcaatccgacctggtttgcgatccaggcgctggtcatt
tgtccgacccgcgaactggccgaccaggtctcgaacgagctgcgccggctggcacggttt
gccgacaacaccaagatcctgaccctgtgcggcggcgcgcccatgcgcccgcaaatcgcc
tcgctcgaacatggcgcgcacatcatcgtcggcacgccgggccgtctgcgcgatcatatc
gggcgcggcagcatcgacctgtcgacggtccagacgctggtgctcgatgaagccgaccgc
atggtcgacatgggcttttacgaggagatctccggcatcgtctcggcctgcccgacgcgt
cgccagacgctgctgttttccgcgacctacccggatgacatccgcaagtcgagtgcgccc
ttcctgcgcgacccgaccgaaatcacggtcgaagcacagcacgacgacaaccgcatcgaa
cagcgtttctatgaagtcggctatgacgaccgcaatgatgctgtcggccgcctgctcaac
aatttcaaaccggcatcggcgctagccttctgcaataccaagatccattgccgtgaactg
gccgatgaattgcgggcgcaaggttttagtgccatggccttgtatggcgaactcgaacag
cgcgagcgcgatgaaatcctggtgctgtttgccaacggcagctgttcggtactggtcgcc
accgacgtagccgcgcgcggactcgatatccagagccttgagatggtgatcaatgtcgat
gtctcgaaagataccgaagtccatattcaccgggttggtcgtaccggtcgcggcgcggca
cgcggactggccttgagcctgtgcgccccgaatgaaaaaaaatgggtcaagctgatcgag
gactaccagcacggacccgtcagctggttcgatctggccgacctcgaagtcgcccccggc
ccggcgctggaagcaccgatggtgacgctgctgatcatgggcggcaaaaaagacaaactg
cgtccaggcgatctgctcggcgccctgaccggcgacgcgggcctcaccaaggaacaggtc
ggcaagatcaacgtgttcgaattcatgacctatgtggcactggaccggcgcatcgcgaag
aaggcgtttgccaaacttgagggtggcaatatcaaggggcgtaacttcaagatgcgattt
atttga
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