Actimicrobium sp. CCC2.4: RHM62_10435
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Entry
RHM62_10435 CDS
T09612
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
actb
Actimicrobium sp. CCC2.4
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
actb03000
]
RHM62_10435
Transcription factors [BR:
actb03000
]
Prokaryotic type
Helix-turn-helix
Other families
RHM62_10435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_8
AAA_5
AAA_2
Mg_chelatase
HTH_7
HTH_28
HTH_IclR
HTH_50
HTH_30
HTH_1
Phage_CP76
Motif
Other DBs
NCBI-ProteinID:
WPX30691
LinkDB
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Position
2226894..2228885
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AA seq
663 aa
AA seq
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MPNKQRLFNPPNDRSIMEAWNGFLTGRVPPANALRRLIDDSWRRCLDVKVDPSRVQAPVA
LSEEALAGLQQQHRALLDAGQQVMATARDLLAETGTIMILTDPQGMILSVEGDPRALSAA
EDIRLSAGSSWNERICGTNAIGTALSIGQPVQIHASEHFCAGIKDWTCSATVIRDPYDGR
ILGAIDVSGLGKTFSPHCLALAVTTAGRIESQLARQEMDVRYHLLERSMAKMSSLHDGVI
ICDRRGYPIKANGCAADALLARGIAFDLNSPGPIATLNLGMFSSTAGAVAPAWLRADWLE
AVVVGGERIGTLLTIPALPARPVSPSVSRVAAADHPHQDFAGIVGESASLSHAISKARLL
ARTNVPVLLLGETGVGKENFSQGIHRAGHPGTQPFVALNCGGLSKDLLASELFGHAEGAF
TGSRRGGMAGKIEAANGGTLFLDEIGEMPLELQPHFLRVLEEGEIYRIGETVPRKISFKL
ISATNRDLHEEVTQGRFRMDLFYRVSVTSIRIPPLRERRGDIAALAAHFLRQFAERYGMA
GKEIGPDVLAALGQHPWPGNVRELRNAIESMFLMAGTAPVLQLDVLPEAIAPALAAGPLP
ADATRGKLEGVELASIRATLAADHGNLTQVARHLGIAKSTLYVKLKKYGLDQDVDGARGA
VSP
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgccgaacaagcagcgcctgttcaatccgcctaacgaccgcagcatcatggaagcgtgg
aatggttttctgaccggacgagtgccgccggccaatgcattgcgccgcctgattgatgac
tcctggcgtcgctgtctcgatgtcaaggttgatccctcgcgggtgcaagcaccggtcgcg
ttgtcggaggaggcactcgcgggtttgcagcagcagcatcgcgctttactcgatgccggc
caacaagtcatggcgacggcccgcgatctgctggcagaaaccgggaccatcatgatcctg
actgatccacaaggaatgatcctgagcgttgaaggcgacccgcgtgcactgagcgcggca
gaagatattcgcctgagcgccggcagcagctggaacgaacgcatttgcggcaccaatgcc
atcggcaccgccttgtcgatcggccagccggtgcagattcatgcgtccgaacatttttgc
gccggcatcaaggactggacgtgttcggcgaccgtgatccgcgatccctacgacggccgc
atcctgggcgcaatcgatgtgtccggattgggcaagaccttcagtccgcattgcctggcg
ctggcagtgactaccgccggccggattgaaagccagctggccagacaggagatggacgtg
cgctaccatctgctcgagcgcagcatggcgaagatgtccagcctgcatgacggcgtcatc
atctgtgaccgtcgcggttatccgatcaaggccaacggctgtgcggccgacgccttgctg
gcacgcggtatcgcgttcgacctgaacagccccggcccgatcgcgacactcaacctgggc
atgttttcatcgacggcaggcgcggtcgcaccggcatggctgcgcgcggattggctggaa
gcggtggtcgtcggcggcgagcggattgggaccttgctgacgataccggcgctgccggcc
cgaccggtatcgccgtcggtttccagggtcgccgccgccgaccatcctcatcaggatttt
gccggcatcgttggcgaaagcgcgtccttgtcgcacgcgattagcaaagcccgcttgctg
gccaggaccaatgtgccggtgctgctgctgggagagaccggcgtcggcaaggaaaatttt
tcgcaaggcatacaccgcgccggccatcccggcacgcagccctttgtcgcgctcaattgc
ggcggcttgtccaaggacttgctggccagcgaactgtttggccatgccgaaggcgcgttc
accggatcgcgccgcggcggcatggccggcaagatcgaagcggccaatggcggcacgcta
tttctggatgaaatcggcgagatgccactcgagctgcagccgcattttttgcgcgtgctc
gaagaaggcgagatttatcgcatcggcgagacagtgccgagaaaaatcagcttcaagctg
atctcggccaccaaccgggatttgcacgaggaagtcacgcaaggccgttttcggatggat
cttttttatcgggtctcggtgaccagcatccgcattccgccgctgcgcgaacggcgtggc
gacatcgcggcactggcggcgcattttctgcggcagttcgccgaacgctatggcatggcc
ggcaaggagatcgggccggacgtcctcgctgcgctcgggcagcatccgtggccgggcaat
gtacgtgaactgcgcaatgccatcgaaagcatgttcctgatggcgggtaccgcaccggtg
ctgcaactcgatgtactgcccgaggcgatcgcaccggcgctggccgcgggtccgctaccg
gctgatgcgacgcggggcaagctcgaaggtgtcgaacttgcgtcgattcgcgccacgctg
gcggcggaccacggcaacctgacgcaggtggccaggcatctggggattgcgaagagcacg
ctgtacgtcaagctcaaaaaatacggactggatcaggatgtggacggggcgaggggcgct
gtcagtccttga
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