Actimicrobium sp. CCC2.4: RHM62_10655
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Entry
RHM62_10655 CDS
T09612
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
actb
Actimicrobium sp. CCC2.4
Pathway
actb03410
Base excision repair
actb03430
Mismatch repair
actb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RHM62_10655 (recJ)
03430 Mismatch repair
RHM62_10655 (recJ)
03440 Homologous recombination
RHM62_10655 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actb03400
]
RHM62_10655 (recJ)
DNA repair and recombination proteins [BR:
actb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RHM62_10655 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RHM62_10655 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RHM62_10655 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
hnRNP_Q_AcD
Motif
Other DBs
NCBI-ProteinID:
WPX30733
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Position
complement(2278980..2280674)
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AA seq
564 aa
AA seq
DB search
MTRLATRAASPRDTERLIQDGIHPVLARLYVARGLLDVRELSSELSSMIAPSGLLHIDAA
AVFLADAIAAKKRMVIVADYDCDGATACAVGLRGLRMLGAEVDFIVPNRFEYGYGLTPEI
VALAQAEKTPDIIVTVDNGIASIDGVAEANRRGIDVVVTDHHLPADTLPAARVIVNPNQP
ECGFPSKNLAGVGVMFYVLLALRAELRKRGIFDQHSQPKLDVLLDLVALGTVADVVKLDA
NNRILVAQGLKRMRAGRMHAGVAALFRASAREARKASPFDLGFALGPRLNAAGRLADMSL
GIECLTTDDEGRAWAIAQQLDAINRERRDIEADMQDTALELLDSFNPQDNSTISVFDAGW
HQGVIGIVASRLKDKFYRPTITFAPAGDGWIKGSGRSIPGFHLRDALDLVSKHAPTLIDK
FGGHAMAAGLTLRAENFDAFAAAFEAVGRSWLTQNQLERVLENDGSLEDAFFTTQFIDLL
DAQVWGQGFAPPVFCDEFRVISQRILKERHLKLQLERNGQRFDAIWFGHTDDLGSRARVA
YRLDANEYNGVTRVQLMVEHAEVM
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtctcgcgacccgtgcggcgtctccgcgcgataccgaacgcctgatccaggac
ggcatccatccggtgctggcgcgcctgtatgtggcgcgtggcttgctcgatgtgcgcgaa
ctgtcgagcgagctgtcgtcgatgatcgccccttccggtttgctgcacattgatgccgca
gcggtatttctggccgatgcgatcgcggcaaaaaaacgcatggtcatcgtcgctgattac
gattgcgatggtgctaccgcatgcgcggtcggcttgcgcggactgcgcatgctgggcgcg
gaagtcgacttcatcgtgccgaaccggttcgaatatggctatggcctgacacccgaaatc
gtcgcgctggcgcaagccgaaaaaacgcccgacattatcgtcaccgtcgataacggcatt
gccagtatcgacggcgtggccgaagccaaccggcgtggcatcgacgtggtcgtgaccgat
caccacctgccggccgatacgctgccggcggcgcgcgtgatcgtcaatccgaaccagccc
gaatgtggcttcccgagcaagaacctggccggcgtcggcgtgatgttttatgtgctgctg
gccttgcgcgccgagctgcgcaagcgtggcatcttcgatcagcacagccagcccaagctt
gatgtgctgcttgatctggtcgcgctcggcacggtcgccgacgtcgtcaagctcgatgcc
aacaaccgcatcctcgtcgcgcagggcttgaagcggatgcgcgccggtcgcatgcatgcg
ggcgtcgcagcgctgttccgggcgtcggcccgcgaggcgcgcaaggccagtccgttcgac
ctcggttttgcgctgggtccgcgtctgaatgccgccggccggctggccgacatgtcgctt
ggcatcgaatgcctgaccaccgacgatgaaggtcgcgcctgggccattgcccagcagctc
gatgcgatcaaccgcgagcggcgcgatattgaggccgacatgcaggacaccgcgctggaa
ttactcgacagtttcaacccgcaagacaattcgacgatcagcgtgttcgacgccggctgg
caccagggcgtcatcggcatcgttgcatcccgcctgaaggacaagttctaccggccgaca
atcacttttgcgccggctggcgatggctggatcaagggctcgggacgctcgatcccgggt
tttcatttgcgcgatgcgctggatctggtgtccaagcatgcccctaccctgatcgacaag
ttcggcggtcatgcaatggccgccggcctgaccttgcgcgccgaaaatttcgatgccttc
gccgcagccttcgaagctgtcggacgcagctggctgacgcaaaaccagctcgaacgggta
ctcgaaaacgatggttcgctggaagatgcgttcttcacgacgcagttcatcgacctgctc
gacgcacaggtctggggtcagggctttgcgccaccggtgttctgcgacgagttccgcgtg
atcagccagcgcatcctcaaggaacgccacctgaagctgcagcttgagcgcaatggccag
cgttttgatgcgatctggttcggtcataccgacgatctcgggagtcgcgcacgggtggcc
taccggctcgatgcaaacgagtacaacggtgtgacgcgcgtgcagttgatggtcgagcac
gcggaagtcatgtag
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