Actimicrobium sp. CCC2.4: RHM62_11385
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Entry
RHM62_11385 CDS
T09612
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
actb
Actimicrobium sp. CCC2.4
Pathway
actb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHM62_11385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
actb02000
]
RHM62_11385
Transporters [BR:
actb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RHM62_11385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WPX30868
LinkDB
All DBs
Position
complement(2448943..2450430)
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AA seq
495 aa
AA seq
DB search
MRTPFPRLLLATLLTGISWSASATTINISLDNDPGKLDPTQSSMIAERMVYQSIFDKLLD
LNEQGAIVPMLAERWTVSDDQKTYTLFLRKDVKFQDGTPFNARAVEFNLLRGQEKSSLRR
NDLKTIRQITVVDDATVRIELSTPFAPFLSILTDRAGMMSSPEAVKKYGEDYVNNPVGTG
PFIYKGRLKGASLTLDKNPNYWQAGLPKADQVVYKIMSDVNVAFNNLRSGQVDITNRFPY
KELSNPLANAKYLVINKPSLGFRGFYFNTTRAPFDRKEVRQAIDLLINRDAIAKVVYNGA
VAVGHSPFSKAHFANDATDIPPKPDLAKAKALLKSAGKEAGFSFRLTLPTTPEELQVGQM
IQGMLRPAGITVSLEKAELAAQIEAGKAGTFDAVMIGWSGRPDPDQNIYDFTVSNGSLNY
SHLANPELDAVLLQARVEGNEAKRKVLYSQVMQILVNEVPYVYLNHDNVLFGVSKAVTGF
RFVPDGVIRTATLDK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgcccttcccccgactcctgctggcaacgctactgaccggtatcagctggtct
gccagcgcgacgacgatcaatatttcgctcgacaatgatcccggcaagcttgacccgacc
cagtcgtcaatgatcgcggagcgcatggtctatcagagcatcttcgacaagctgctcgac
ctcaacgaacagggcgcgatcgtgccgatgctggccgaacgctggaccgtttcggacgac
cagaaaacctacacgctgtttctgcgcaaggacgtcaagttccaggatggcacgccgttc
aatgccagggctgtcgaattcaacctgctgcgcggccaggaaaaatcctcgttgcgccgc
aatgacctcaagaccatccgccagattaccgtcgtcgatgacgccaccgtgcggatcgag
ctgagcacgccgttcgcacccttcctgtctatcctgaccgaccgcgccggcatgatgtcg
tcgccggaagccgtcaaaaaatacggcgaggattacgtcaacaatccggtcggtaccggt
ccgttcatctacaagggtcgcttgaaaggcgcgtcgctgacgctcgataaaaacccgaat
tactggcaagccggtttgcccaaggccgaccaggtcgtctacaagatcatgagcgacgtc
aatgtcgccttcaacaacctgcgcagcggccaggtcgatatcaccaaccgctttccgtac
aaggaactgagtaatccgctggccaacgccaagtatttggtgatcaacaagccatcgctg
ggctttcgcggcttttacttcaataccacgcgagcaccgttcgatcgcaaggaagtgcgc
caggcgatcgacctgctgatcaaccgcgacgccatcgccaaggtggtttataacggtgcc
gtggcggtcggccattcgcccttcagcaaggcccattttgccaacgatgcgacggacatc
ccgcccaagcccgacctcgccaaggccaaggccctgctcaaaagcgccggcaaggaagcc
ggtttcagcttccggctgacgctgccgaccacccccgaagaattgcaggtcgggcaaatg
attcagggcatgctgcgtcctgccggcatcaccgtgtcgctggaaaaagccgagctggcc
gcgcagatcgaggcgggcaaggccggcaccttcgatgcggtcatgatcggctggagcgga
cggcctgatccggaccagaacatctacgatttcacggtcagcaatggctcgctgaattac
tcgcacctggccaatccggagcttgatgcggtactgctgcaagcccgcgtcgaaggcaac
gaagccaagcgcaaagtcctgtattcgcaggtcatgcaaatcctcgtcaacgaggtgccc
tacgtctacctgaaccatgacaacgtgctgttcggcgtctcgaaagcggtcaccggtttt
cgcttcgtgcccgatggcgtgatcagaaccgcgacgctggacaaataa
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