Actimicrobium sp. CCC2.4: RHM62_11390
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Entry
RHM62_11390 CDS
T09612
Name
(GenBank) DEAD/DEAH box helicase
Organism
actb
Actimicrobium sp. CCC2.4
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
SWIM
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
WPX30869
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All DBs
Position
complement(2450883..2454188)
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AA seq
1101 aa
AA seq
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MTMTSHAFPFDHAQLLRWLGPATLAKARPYVRRVSQLEWNNNLLRGEVQGSELTPYQSTV
AFRQAGKELVIQSTCSCPVGFDCKHVAALMMASLEHSDAVRTEVRPELIHWLEQLRARVS
TLDPKKPRVTRPNTALVYVLAFSRYHRNFEVLFFKAGVKRDGTISAIGAPWNNVESALLN
APQFISEDDLAILRLLWMGRSRAGYGSGFGLAGSNGATAIEKMLATGRLFAQDEHGTIAV
VALKPGEPRDGLIAWQPGHADRLQPLLQTSPAATSVILVDPLWYADAVTAEAGLVNLSCP
ANQIAEYLTMPPITLAEVPMVAAVLRQIAPEMPVPPVEQMAAIRIIDCVPQPVLQLDTIA
VHAAHVGSYGPYGKEFDLGSVRFDYEGVAFDLGSTTTLVKTATQELVQVKRQPLVEKARL
AELRKTGIDHVPSGRIFASTPLPPSMWGFLDPDAWPGFVEDDLPVLRDKGWRIDMGADFR
FNVIDIDGIDGAMHQAADGWFDLDMGILVGERKVRLEPLLAELFQRDARWLKGGLDSISD
DEPIELKTDRGERLRLRADRLKPVVRVLIDLFDGNTGEPLRVSRFDAGRLEALNDTGRWQ
FNSEDSIRQLAQRLKAGGGISDVAVPASLKAELRTYQLQGVSWMQFLREHSLSGVLADDM
GLGKTIQTLAHLLVEQEAGRLLRPALVVVPTSLVHNWCDEARRFAPSLRVLVLHGAGRKD
QFDRIDEHDLILTTYALLWRDHDVLSLHNYHLLILDEAQFVKNASTRAAVAIRSIKASHR
LCLTGTPMENHLGELWSMFDFLLPGFLGAQKDFTKRWRTPIEKAGDTVRRDLLARRIRPF
MLRRRKNEVATELPPKTLVVRQVELEGGQRDLYEIVRTAMHDKVRAVIAEMGLARSHIVV
LDALLKLRQVCCDPRLVKLDQATNVKESAKLELLLSMLPDMIEEGRKVLLFSQFTGMLAL
VAKAVEKAGIPYVLLTGDTTDRATPVRRFQEGEVPLFLISLKAGGVGLNLTAADTVIHYD
PWWNPAAENQATDRAHRLGQEKPVFVYKLIVAGSIEEKIVALQDKKAALAEGILSEDGAA
AVKFSGEDLEALFAPMPAMDK
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgacatcccatgcttttccgttcgaccacgcgcaactactgcgctggctcggc
cctgccacgctggccaaggcacgcccgtacgtgcggcgcgttagccaactcgaatggaat
aacaacctgctgcgcggcgaggttcagggttccgaactgacgccgtatcaaagcactgtg
gcgttccgtcaggccggcaaggaactggtgatccagtcgacctgcagttgtccggtcggc
tttgactgcaagcatgtggccgcgctgatgatggccagcctcgagcatagcgacgccgtc
cgcaccgaagtgcgaccggaactgatccactggctggaacaattgcgcgcccgggtgtcg
acactggacccgaaaaaaccgcgcgtcacgcggcccaatacagcgctggtttacgtactg
gcgttttcgcgctatcaccgtaatttcgaggtgctgttcttcaaggccggcgtcaagcgc
gacggcacgatcagtgccatcggtgcgccctggaacaatgtcgaaagcgcgctgctcaat
gcgccgcaattcattagcgaagacgacctcgccatcctgcgtctgctgtggatgggacgc
tcgcgcgccggctacggcagcggcttcggcctggccggcagcaacggtgccaccgccatc
gaaaaaatgctcgccaccggacgcctgtttgcccaggacgaacacggcaccatcgccgtc
gtcgcgctcaaaccgggcgagccgcgtgatggcctgatcgcctggcaaccgggacacgcc
gaccgcttgcagccgttgctgcaaaccagccctgccgccaccagcgtgatcctggtcgac
ccgctctggtatgccgatgccgtcacggccgaagccggactggtgaacctgtcctgcccc
gccaaccagattgccgaatacctgacgatgccgccgatcacgctggccgaagtgccgatg
gtcgctgccgtgctgcgccagatcgcgcccgagatgccggtgccgccggtcgaacagatg
gctgcgatccgcatcatcgattgcgtgccgcaaccggtgctgcagctcgacacgattgca
gtgcatgccgcgcatgtcggcagctacggaccgtatggcaaggaattcgatctcggtagc
gtgcgcttcgactacgagggcgtcgccttcgatctcggcagcaccaccacgctggtcaag
accgctacgcaggaactggtgcaggtcaagcgtcagccgctggtcgaaaaagcccgtctg
gccgaattacgcaaaaccggtatcgaccatgtgccatcgggccgcatttttgccagcaca
ccgctgccaccgtcgatgtggggctttcttgatccggacgcctggccgggcttcgtcgaa
gacgaccttccggtgctgcgcgacaaaggctggcgcatcgacatgggggctgacttccgt
ttcaatgtgatcgacatcgatggcatcgacggcgcaatgcatcaggccgctgatggctgg
ttcgatctcgacatgggcatcctggtcggtgagcgcaaggtgcgccttgagccgctgctg
gcagagctattccagcgcgatgcgcgctggctaaaaggtggcctcgacagcataagcgat
gacgaaccgatcgaactgaagaccgatcgcggcgaacgcttgcgcctgcgcgccgaccgg
ctcaaaccggtggtgcgggtgttgatcgatctgttcgacggcaacaccggcgagccgctg
cgggtctcgcgcttcgatgccggccggctggaggcattgaacgataccggtcgctggcaa
ttcaatagcgaggactcgatccggcaactggcgcagcggctcaaggccggtggcggcatc
agcgatgtggcggtgccggccagcctgaaggccgaactgcggacctaccagttgcagggc
gtgtcgtggatgcagtttttgcgcgagcacagcctgtcgggcgtattggccgacgacatg
ggcctgggcaaaaccatccaaacgctggcgcacctgctggtcgaacaggaagccggccgg
ctgctgcggcccgcgctggtcgtggtgccgacttcgctggtgcacaactggtgcgatgaa
gcacggcgttttgcgcccagcctgcgcgtgctggtgctgcatggtgccggtcgcaaggac
cagttcgaccggatcgacgaacacgacctgatcctgacgacgtatgccttgctgtggcgc
gaccatgacgtgctatcgctgcacaattatcacctgctgatcctcgatgaagcgcagttc
gtcaagaacgccagcacccgcgctgctgttgcgatccgcagcatcaaggccagccaccgg
ctttgcctgaccggcacgccgatggaaaaccacctcggtgaactgtggtcgatgttcgac
ttcctgctgcccggttttctgggtgcgcaaaaggacttcaccaagcgctggcgcacgccc
atcgaaaaagccggagacacggtgcgccgcgatctgctggcgcgccggatccggccgttc
atgctgcgtcgacgcaagaacgaagtcgctaccgaactgccgccgaaaacgctggtggtg
cgccaggtcgaactcgaaggcggccagcgcgacctgtatgaaatcgtccgcaccgcgatg
cacgacaaggtgcgcgcggtgatcgccgaaatggggctggcgcgcagtcatatcgtggtg
cttgatgcgctgctcaaactgcgccaggtctgttgcgatccgcgtctggtcaagctcgac
caggccaccaacgtcaaggaatcggccaagctagaactgctgctgtcgatgctgccggac
atgattgaagagggccgcaaagtgctgctgttctcgcagttcaccggcatgcttgcgtta
gtcgccaaagcggtcgaaaaagccggcatcccgtacgtactgctgaccggcgacaccacc
gaccgggccacgccggtacggcgttttcaggaaggcgaagtaccgctgttcctgatcagt
ctgaaggccggcggtgtcggactgaacctgacggcggccgacaccgtgatccactacgac
ccgtggtggaatccggcggcggagaatcaggccaccgaccgcgcgcatcggcttggtcag
gaaaaaccggtgttcgtctacaagctcatcgtcgccggcagcatcgaagaaaaaatcgtc
gcgctgcaggacaagaaagctgcgctggccgaaggcatcttgtcggaggatggggcggct
gcggtgaagttttccggggaagacctggaagcgctgtttgcgcctatgccggcgatggat
aaataa
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