Actimicrobium sp. CCC2.4: RHM62_12210
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Entry
RHM62_12210 CDS
T09612
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
actb
Actimicrobium sp. CCC2.4
Pathway
actb03030
DNA replication
actb03430
Mismatch repair
actb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHM62_12210
03430 Mismatch repair
RHM62_12210
03440 Homologous recombination
RHM62_12210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actb03032
]
RHM62_12210
03400 DNA repair and recombination proteins [BR:
actb03400
]
RHM62_12210
Enzymes [BR:
actb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHM62_12210
DNA replication proteins [BR:
actb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHM62_12210
DNA repair and recombination proteins [BR:
actb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHM62_12210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
WPX31017
LinkDB
All DBs
Position
complement(2673925..2675313)
Genome browser
AA seq
462 aa
AA seq
DB search
MAYNPVHPRLAFVDLETTGATAVIDRITEVGIVEVDEDGVRHWSSLVNPHRHIPEFIEGL
TGISNAMVADAPGFDELAAEIHQRLEGRIFLAHNARFDHGFLKNEFKRVGIDFRPTVLCT
VKLSRKLYPEFAKHNLDTLAERHQLQVTERHRALGDAQLIWQFWETIHATFPHAQINAAI
KELTARPNLPSQLDAAMVDDLPSTHGVYLFFGEGALPLYVGKANNLRRRVLSHFSGDHLS
AKELELSQQIRRIEWIATAGELGALLKEAMLVKQLSPSHNRQLRRSSAACLWRLDAQSQI
TLVKTDDLPAADEAELFGPFATHRKATTALTAIATAHQLCLVLLGLEKVAAGKPCFASQV
GQCKGACCARESLASHTARLRMALETSRLHPWPYAGPIGIREEAALHVIDNWSYLGTAAS
EAEARQLTEQAPPRFDRDVYQLLHKKLASMPDQITPLYRGVP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcctataacccggtccatccccgcctcgcctttgtcgacctagaaaccaccggcgcc
accgccgtcattgaccggatcaccgaagtcggcatcgttgaagtcgatgaagatggcgtg
cggcactggagcagtctggtcaatccgcatcggcatattcccgaattcatcgaaggtctg
accggaatttcgaatgcgatggtggccgatgccccgggcttcgacgagctggcagccgag
atccatcagcggctcgaagggcgtatttttctggcgcacaatgcgcgtttcgaccacggc
tttctgaagaacgaattcaagcgcgtcggcatcgacttccggccgaccgtgctgtgtacc
gtcaaactctcgcgcaagctctatcccgaatttgccaagcacaatctcgatacactggcc
gagcgccatcagttgcaggtgaccgaacgccatcgcgcgctcggcgacgcccagctgatc
tggcaattctgggaaaccatccacgccaccttcccgcatgcacagatcaatgccgccatc
aaggaactgaccgcacggccgaatttgccctcgcagctcgatgccgcgatggtcgatgac
ttgccgtccacacacggcgtgtacctgttttttggcgagggcgcgctgcccttgtatgtc
ggcaaggccaacaacttgcgccggcgcgtgctgtcgcatttcagtggcgaccatctttcc
gccaaggagctggaactatcgcagcaaatccgccgcatcgaatggattgccaccgccggc
gagctgggtgcgctgctcaaggaagcgatgctggtcaagcaactgtcgccatcgcataac
cggcaattgcgccgttcgagtgccgcctgcctctggcgtcttgatgcgcaatcgcagatc
acgctggtcaagaccgacgacttgcccgccgccgacgaggccgagctgttcggtccgttt
gccacccaccgcaaggccaccaccgcgctcacggccatcgccactgcgcaccagctttgc
ctggtcttgctcggattggaaaaagtcgctgccggcaagccgtgttttgccagccaggtc
ggtcagtgcaagggcgcgtgctgcgcgcgtgaaagcctcgcgtcgcataccgcgcgcttg
cgcatggcactcgaaaccagccgcctgcatccgtggccctatgccgggccgatcggcatc
cgtgaagaagcggccctgcatgtcatcgacaactggagctatctgggcacggctgccagt
gaagccgaagcgcggcaactgaccgaacaggcaccgccgcgctttgaccgcgacgtctac
cagcttttgcataaaaaactggcgtccatgccggaccagatcaccccactttatcgaggc
gtaccctga
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