Actimicrobium sp. CCC2.4: RHM62_14220
Help
Entry
RHM62_14220 CDS
T09612
Name
(GenBank) NEL-type E3 ubiquitin ligase domain-containing protein
Organism
actb
Actimicrobium sp. CCC2.4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NEL
LRR_4
LRR_8
FNIP
ATG17_like
Y_phosphatase
TTSSLRR
LRR_9
Motif
Other DBs
NCBI-ProteinID:
WPX31393
LinkDB
All DBs
Position
3090051..3093419
Genome browser
AA seq
1122 aa
AA seq
DB search
MPVFVATIFSLKAFSMSPPISPRSPNIASTSHQMNVFEPHGLLTLPSKLWNALRNIVVPP
NKQEFNREIPTTVTGVGCPAHTAVNVLIGHPSQINASIHANVINLDSQRFKRSASAAIGT
ARIAMAGQSPQDFNLCERFLAQSLISGKGLFQFVSPRANKTTLGISSKRSKESKAIPIID
QLKYQWERSLLMNETIYLAGQRFEVTGLEPKILQENSPSEDHCSYELTAIDRSDGSTKKI
LLTQAGFSFSDRVLSMGDIERANDLMNLQVEKELNFPTCSKATQQSIQADPLVVSYAGIG
RNATLITYRETLSRMKAEPDEKILDEKWLDDTLFDIVRAGREDRGLNFIHSDAQLQALRS
ALMHKIESRTVHTIPGPSKRDEAMRSSVSLAMLPIQLPLSPQSILPASAIIDTNHDIPFT
SLTIQEKTLNDLYNEWHIWERQIPGGSQEDRKTAVENMKLWIDKNDTNAKLKLNDLRLTS
LPDNLPPGVRHLEIFLNRLTCLPENLPDSLAYMDAGDNCLTKLPAKLPLNLKSLIISNNE
LTQLTGSLPAELEIINASFNSISKLPDYLPTSLKSLQLTRNRITTLPETLPDSIENLMLN
CNELVGFPDKLPDALKELSVGSNYLTVLPENFPQYLEKLDLSSNSIEILPYNLPATITTL
TVVQNNLTGLPETLPESLEKLSAFNNHITKVPDTLPSGLKKLLLSDNELTDISNSLPTRL
EEIDVSNNRLTGLVSLARFQELKRLNLLNNSLTNLPDDIFHLNRNCEIQLETSGFSDGVF
NRLAFIAQDVNYAGPRIIFQTRAARDPLLTRPLNEEVCSWREELTGTQFNQWNSVWNDDL
TRETTIAFSTFLSRARQISDYTNGESRPATVQRINLLLDQLQSNSNSRVDCYNIAVEAIG
SCNDRIALRLIDMEIQCRIDITGKEIDEGGFDSAPQALITLCKGIYRLKILARAAERKAN
SLNLVDPIEVHLGYILRFAEEFSLPVQIKSMQFPRLADLTQEDLLSARRELSSSDLPDEE
KITSNAEYLLFLSTYPLMVKMLRRIVPDRMETAMREVEPSIEARKAEIYKKLEQLDDNAD
DYQLRAVELNEDFRRVDIEAPGQAIRPVLLDFLAQNKISATF
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
ttgccggtatttgtcgccacaatattttccctcaaagcattttctatgtcgccaccaata
agcccccgctcgccaaatatcgcatccacgtctcatcaaatgaatgtttttgaaccacat
ggattactgactttaccttcgaaattgtggaatgcattacgtaacattgtggttcctcca
aacaaacaggaattcaatcgagagattccaacgactgtcaccggtgtgggttgccctgcc
cacacagcggtcaatgtactcattggccatccatcccagattaacgcttccattcatgcc
aatgtcatcaatctcgattcccaacgcttcaaacgatctgctagcgcagcgataggtact
gctcgaattgcaatggctggtcaatcaccgcaggattttaatctttgcgaaagatttctt
gcgcagtcactcatttctggaaagggtttatttcagttcgtttcaccaagagccaataaa
accacgttagggatttcatcgaagcgcagtaaagaaagtaaagcaattccaatcatcgat
caactgaaatatcaatgggaacgatcccttttgatgaatgaaacaatttaccttgctggt
caacgttttgaagtcactggactggaaccgaaaatcttacaggaaaatagcccatcagaa
gatcattgcagctatgagcttacggcaattgataggtctgacgggagtacaaaaaaaata
ctattgacgcaagcgggcttttcattttcagacagggtactgagtatgggcgatattgag
agagctaatgacttaatgaatcttcaagtcgaaaaagaacttaattttccgacgtgcagc
aaggcgacacaacagtcaatacaggctgatcctttggttgtcagctatgccggtatcgga
cgcaatgcaacactgatcacttatcgcgagacgctatcacgcatgaaagctgaacctgat
gagaagatattggacgaaaagtggctggacgatacgctctttgatattgttcgggcggga
cgtgaagatcgcggtctgaatttcattcattcggatgcgcaattgcaggctttacggtcg
gcgttaatgcacaaaattgaatcacgtacagtgcacactattcctggcccctcgaagcga
gatgaggcgatgagaagctccgtctcgctggcaatgcttccaatacagctgcctctgtca
ccacaatccattctacccgcttcagcgattatcgatacaaatcacgatattccatttaca
agcttaactattcaagaaaaaaccttaaatgacttatataatgaatggcatatttgggaa
aggcagattccgggaggaagtcaggaagaccgcaaaacagcggtcgaaaacatgaaactt
tggatcgataagaatgacacgaatgccaagcttaaattaaacgacctacgattaaccagc
cttcccgacaatctgccaccgggggtgcgccatttggaaatttttcttaaccgacttacg
tgcttacctgaaaatttaccagacagtctcgcctatatggatgctggtgataattgccta
accaaattacctgcaaaattaccattaaatttaaaatctctaataatatcaaacaatgaa
ctgactcaactgacgggctctctcccggctgagttggaaataattaatgcaagcttcaat
agtattagtaaattgcccgattatttaccaactagtttgaagtcactgcagttgactaga
aaccgtattaccactttacccgaaacactaccagatagcattgaaaatcttatgctgaat
tgcaatgaactggtcggctttccggataaattacctgacgcactcaaagaactgtccgta
ggatctaattatttgactgtattgccagaaaatttcccccaatatttggaaaaattagat
ttgagtagcaacagtattgaaatacttccatataatttacctgcaacgatcacgacactt
acagttgttcaaaataatttgaccggcttaccagaaactctaccggaaagtcttgaaaaa
ctttctgcatttaataatcacattactaaagtaccggataccttaccgtcagggctaaag
aaattgttactttcagataatgagttgactgacatatccaattctctgccaactagattg
gaagaaattgacgtctctaataaccgattaacaggactagtctctctcgctcgttttcag
gaattaaaaagattaaatctgctcaataattcactcactaacttacctgatgacatcttt
catttaaatcgaaactgcgagattcaacttgaaacaagtggattctcggacggagtattt
aatagactcgcttttattgctcaggatgtgaattatgcgggtccgcgaattatttttcaa
acgcgtgcggcgcgcgatcctctgctgactcgtccactaaatgaagaagtttgttcttgg
cgtgaagaactaaccggtacgcaattcaatcagtggaacagcgtctggaacgatgacctc
acgcgtgagaccacaatagcattttcaacgtttctttcccgtgcaagacaaattagtgat
tatacaaacggggagtcaaggccggctacagtacagcgcattaacttattactcgatcaa
ttacagtccaactcgaactcacgcgtagattgctataacatcgccgtcgaagccattgga
agctgcaacgaccgtatcgccttgcggttaatcgacatggaaatacagtgccgaattgat
attaccggcaaagaaatcgacgaaggtggttttgattcggcaccgcaagcgctgattact
ctctgcaaaggcatataccgactgaaaattctggccagggcggccgaacgtaaggccaac
agtctgaatctggttgatcccattgaggtacatctcggatatattctgcgctttgccgaa
gaattttcgctgcctgttcagattaaatcgatgcagtttccacgccttgccgacctcacg
caggaggacttgctaagcgcaagacgcgagctttccagtagcgatttgcctgacgaagaa
aaaataaccagtaatgccgaatatctgttatttctttcgacctatcccttgatggtcaaa
atgttgcgaagaattgttccagatcggatggaaacagcgatgcgagaagttgagccgtct
attgaagcaaggaaggccgaaatctataaaaaactggagcaacttgatgataatgccgac
gattatcaactccgcgctgtcgagttaaatgaggatttccggcgtgtagatattgaagca
cccgggcaagccatccgtcctgtattgcttgactttctcgcgcagaacaaaatctccgca
actttctag
DBGET
integrated database retrieval system
