Actimicrobium sp. CCC2.4: RHM62_14430
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Entry
RHM62_14430 CDS
T09612
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
actb
Actimicrobium sp. CCC2.4
Pathway
actb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RHM62_14430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actb03400
]
RHM62_14430
Enzymes [BR:
actb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RHM62_14430
DNA repair and recombination proteins [BR:
actb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RHM62_14430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WPX31431
LinkDB
All DBs
Position
complement(3147937..3148812)
Genome browser
AA seq
291 aa
AA seq
DB search
MTPAAGGLTRRTRFLQALGIGPVWVQRDTVVSDDVPLPVAIAVPAAPPVAGVAAPVVSKQ
DKAVSAWDDASVPVRAAAAAAPILVMPADEGAVAIARMSWQELELAVASCTRCPLCRNRK
QAVLGAGDQKPGWLFVGEGPGHVEDQQGEPFVGPAGKLLDNMLLALELPRGENNYLANAV
KCRPVGADGKDRPPSVDESAACRPYLERQIALLQPAVIVALGKVAALSLLGGDPKIAVAA
LREHTHRYGSIPVVVTYHPAYLLRKPLDKAKSWRDLCLATQAYASDGKLAV
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggcagcgggcgggctgacgcgccgtaccaggttcttgcaggcattggggatt
ggtccggtctgggtgcaacgggatacggtggtgtcggacgacgtgccgttgccggtcgcc
atcgcggtgccggcggcgccaccggttgccggggttgccgcgccagtggtgtcgaaacag
gataaagccgtttcggcttgggatgatgcatcggtccctgtgcgtgccgccgctgcggct
gcaccgatccttgtaatgccggccgatgaaggcgctgtcgccatcgcccgcatgtcctgg
caggaactcgaactcgctgtcgccagttgcacccgctgtccgctttgcaggaaccgcaag
caggcagtgctcggtgccggtgatcaaaagcccggttggttgttcgtaggcgaaggtccg
gggcatgtcgaggaccagcaaggcgagccattcgtcggtcctgcgggcaagctgctcgac
aatatgttgctggcactggagctgccgcgcggcgaaaacaattatctggccaatgccgtc
aaatgccgtccggttggtgctgacggcaaggaccgtccgccaagtgtcgacgaaagcgcc
gcctgccggccgtacctggaacgccagatcgccttgctccagcctgccgtcatcgtcgcg
ctgggcaaggtggccgccctgtcactgctaggtggcgatccgaagatcgccgttgctgcc
ttgcgcgaacacacccaccgctacggcagcatccccgtcgtagtgacctatcatcccgcc
tacctgctacgcaaaccactggacaaggccaagtcatggcgcgacctgtgcctggccacg
caggcctatgcgagtgacggcaaacttgcagtctga
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