Actimicrobium sp. CCC2.4: RHM62_15805
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Entry
RHM62_15805 CDS
T09612
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
actb
Actimicrobium sp. CCC2.4
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
actb03000
]
RHM62_15805
Transcription factors [BR:
actb03000
]
Prokaryotic type
Helix-turn-helix
Other families
RHM62_15805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
HTH_30
AAA_5
AAA
Mg_chelatase
AAA_2
AAA_16
IclR_C
HTH_7
HTH_23
HTH_28
HTH_22
HTH_29
HTH_Tnp_ISL3
HTH_38
NB-ARC
AAA_3
TIP49
HTH_11
Parvo_NS1
Diacid_rec
AAA_7
NUMOD1
HTH_50
Motif
Other DBs
NCBI-ProteinID:
WPX34211
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Position
3436658..3438535
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AA seq
625 aa
AA seq
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MIEESHQRSANYGVPRTASPDYDPLGRADMALVLEQNRLLHSHAAPVMETLYEQIINTHN
MVILTDVTGLIIHTLGDADFLEKADRVALTPGVAWSEQSKGTNAIGTAIAEKVPTSIHAD
QHYLDANRFLTCSAAPIFDVMGNVVGVLDVTGDQHNFHKHTMALVRMSAQMIENQLFAAA
FEESIKLSFHSRPEFLGTLMEGIASFTPGGRFLSASRSGLFQLGLPMSALQTHTFSSLFG
MPISALMDHYRTASPGPLQLCLHSGVRVYAKCADLRLPTTSFQHTTSNARSTEAEPAAAP
LSSHEQSKARLSSLRYLNTGDEQVAVVIDKLKKVIGRDISILITGETGTGKELLAQAIHN
DSPRKAGPFVAVNCASIPETLIESELFGYEDGAFTGARKKGSIGKILQANGGSLFLDEIG
DMPLNLQARLLRVLQERMVTPLGSTKSIPVNVALTCATNRNLRDMIARNLFRDDLYYRLN
GLVVRLPPLRERTDLDVVIDKLLAAEGNGVRYTVAPAIMAMFRSHGWPGNFRQLTNLMRT
AMVMAGDDHEIRIEHLPDDFLDDIATTVPAAGKSVNPTTHDDLATLEDVELSVIQQSLAA
HDGNVSATARALGVSRNTIYRKIHP
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagaatcccatcagcgttccgccaactacggcgtcccgagaaccgcctcgccg
gattacgatccgcttggccgcgccgacatggccctcgtgctagaacagaaccggctattg
cacagccacgccgcacccgtgatggaaacgctctacgagcaaatcatcaacacccacaac
atggtgatcctgaccgatgtcaccggcctgatcatccacacgctgggcgacgccgacttc
ctcgaaaaagccgatcgtgtcgccctgacgcccggcgtggcgtggtcggagcaaagcaag
ggcaccaatgcgatcggcaccgccatcgccgaaaaagtgccgaccagtattcacgccgat
cagcactacctcgatgcgaaccgcttcctgacctgttcagccgccccgatcttcgacgtg
atgggtaatgtggtcggcgtgcttgatgtcaccggcgaccagcataattttcacaagcac
acgatggcgctggtgcggatgtcggcgcagatgatagagaaccagctgttcgccgcagcc
tttgaagagtcgatcaaactgagctttcatagccggccggaattccttggcacgctgatg
gaagggattgccagcttcacgccgggcggtcgctttttgtcggccagccgcagcggcctg
ttccagctcggcttgccgatgtcggccctgcagacgcataccttcagctcgctgttcggt
atgccgatctcggccctgatggatcattaccggaccgcgtcaccaggcccgctccaactg
tgcctgcacagcggcgtgcgggtgtatgcgaagtgcgccgacctgcgtctgcccaccacc
agtttccagcacacgaccagcaatgcacgcagtaccgaggccgagcctgccgccgcgccg
ctgagcagccacgaacaaagcaaggcgcgtctgtccagcctgcgctacctcaacaccggc
gacgagcaggtcgccgtcgtcatcgacaaactgaaaaaagtcatcggccgcgatatctct
atcctgatcaccggcgagaccggcaccggcaaagaattgctggcgcaggcgattcacaat
gattcgccgcgcaaggccggcccgttcgtggcagtcaattgcgcctcgattcccgagacg
ctgatcgagtccgaactgttcggctacgaagacggcgccttcaccggcgcccgcaaaaaa
ggcagcatcggcaagatcctgcaagccaacggcggctcgctgtttctcgatgaaatcggc
gacatgccgctgaacttgcaggcgcggctgttgcgcgtactgcaggagcgcatggtgacg
ccgctgggcagcaccaagtcgatcccggtgaacgtggcgctgacctgcgcgaccaatcgc
aacttgcgcgatatgattgcgcgcaatctatttcgtgatgacttgtactaccgcttgaac
gggctggtggtacgcctgccgccgctgcgcgaacgcaccgaccttgacgtggtcatcgac
aagctgctggccgctgaaggcaatggcgtgcgctatacggttgcgccagccatcatggcc
atgttccgctcgcatggctggccgggtaatttccgccagctaaccaacctgatgcgcacc
gccatggtgatggccggtgacgaccatgaaatccgcatcgagcatttgccggacgacttc
ctggacgatatcgcgaccaccgtcccggcggccggcaagtccgtcaatccgacgacccat
gacgatctggccacgctcgaagatgtcgaactgtcggtgatccagcaatcgctggccgcg
catgatggcaatgtatctgccacggcgcgcgcgctgggtgtgtcgcgcaatacgatatat
cgcaagattcatccgtag
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