Actimicrobium sp. CCC2.4: RHM62_16355
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Entry
RHM62_16355 CDS
T09612
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
actb
Actimicrobium sp. CCC2.4
Pathway
actb03030
DNA replication
actb03430
Mismatch repair
actb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHM62_16355 (dnaX)
03430 Mismatch repair
RHM62_16355 (dnaX)
03440 Homologous recombination
RHM62_16355 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actb03032
]
RHM62_16355 (dnaX)
03400 DNA repair and recombination proteins [BR:
actb03400
]
RHM62_16355 (dnaX)
Enzymes [BR:
actb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHM62_16355 (dnaX)
DNA replication proteins [BR:
actb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHM62_16355 (dnaX)
DNA repair and recombination proteins [BR:
actb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHM62_16355 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_30
AAA_22
AAA_16
AAA_14
AAA_18
AAA_2
nSTAND3
Glyco_tranf_2_5
AAA_28
AAA_24
SKI
TsaE
DUF3646
PIF1
Mg_chelatase
AAA_assoc_2
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
WPX31789
LinkDB
All DBs
Position
complement(3549717..3551678)
Genome browser
AA seq
653 aa
AA seq
DB search
MSYQVLARKYRPRSFDTLVGQEHVVRALSHALESGRLHHAYLFTGTRGVGKTTLSRILAK
AFNCIGIDGNGGITATPCGVCAACSAIDAGRFVDYIELDAASNRGVEEMAQLLEQAVYAP
SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL
KQMPPGHIVAHLDDILGQEGIAFETPALRLLAQGAHGSMRDALSLTDQAIAYAAGTVTLD
AVQGMLGALDQSYLIRLLDALAAQDGAGLLAVADEMAVRSLSYSSALRDLGTLLHRLALA
QSVPAALPEDLPERADIVRLAALFDAEEVQLFYQIVVHGRNELGLAPDEYAGFSMTLLRM
LAFRPVHAGIGPAPAPLAAPRAPARLSAAPAAVVSSTPVAPRAPAPTTAAPATAALSPAR
AALEAARGMTRPNGGVSNLPPARAAEPKPEPRAKPAAAPAPWEDNMPPMGEFPDDEQFEQ
AQKKTEPRPVTPPVATPTPARAIAAPAPVAAPPEPVAAMVVIPVPELDWDGDWPVLAAQL
AVRGVVQQLALQAELVRCDKAGGVALHLRVPLETLASPANIDKLATALSTHFSQPVRVTT
ELGIARHTANAKANAERAAQQQVAEQQIHADPFVLAMMREFGATIVPGSIKPH
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcaagttcttgcccgaaaatatcgtccccgcagtttcgacacgctggtcgga
caagagcacgtggtgcgggcgctcagtcatgcgctcgagtccggacgactgcatcacgcg
tacctgttcaccggcacccggggtgtcggcaaaactaccctctcacgcatcctcgccaag
gccttcaattgcatcggtatcgatggcaatggcggcatcaccgccacgccgtgcggtgtt
tgtgccgcctgcagcgcgattgatgccggccgctttgtcgattacatcgaacttgatgcg
gcctcaaaccgcggcgtcgaagagatggcgcagttgctggagcaggcggtctacgcgcca
tcgaatgcgcgcttcaaggtctacatgatcgatgaagttcacatgctcaccaaccacgcc
ttcaatgcgatgctgaagacgctggaagaaccacccgaacacgtcaagttcatcctcgcc
accaccgatccgcaaaaaattccggtcaccgtgctgtcgcgctgcctgcaattcaacctc
aagcaaatgccgcccgggcacatcgtcgcgcatctcgacgacatccttgggcaggaaggc
atcgccttcgagacaccggcactgcgcctgctggcacaaggcgcgcacggttcgatgcgc
gacgcgctgtcgctgaccgaccaggccattgcttacgccgccggtaccgtcacgctcgat
gcggtgcagggcatgctgggtgcgctcgaccagtcgtatctgatccgcttgctcgatgcg
cttgccgcgcaggatggtgccggcctgctggccgtggccgacgaaatggccgtgcgcagc
ctgtcgtacagcagcgccttgcgggatctggggaccttgttgcatcgcctcgcgctggcg
caatcggtacctgcagcactacccgaggacttgccggaacgcgccgatatcgttcgtctg
gccgcgctgttcgatgccgaagaagtacaactgttctaccagatcgtcgtgcatggtcgc
aatgaactcggactggcaccggatgaatacgccggcttttcgatgacgctgctacgtatg
ctggcgttccgtccggtacatgccggcatcggcccggcaccggcgccgctcgctgcaccg
cgcgcaccggcccggctcagtgccgcaccggcagcagtggtcagcagcacgccggtggcg
ccgcgtgcgccggcgccaacaacagcggcaccggccactgcagcgctcagtcctgcccgc
gccgcgctcgaagccgcgcgcggcatgacgcgacccaatggcggggtatcgaatctgccg
ccggcgcgcgccgccgaacccaagcccgagccgagggccaagcccgccgctgcgcccgcg
ccatgggaagacaacatgccgccgatgggagaattccccgacgacgagcagttcgaacag
gctcaaaaaaaaactgaaccgcgaccggtaacgccgccggtggccacaccgacgcccgcg
cgcgcgatagccgcgcctgcgcctgtagcagcaccgcccgaacccgtcgccgcgatggtc
gtgatcccggtgcccgagctggactgggatggcgactggccggtgctggcggcgcaactg
gcggtgcgcggcgtggtccagcaactggcgctgcaagccgagctggtacgctgcgacaag
gccgggggggtcgcgctgcatttgcgcgtgcccttggaaacgctggcctcgccagcgaat
attgacaagctggcgaccgccctgagtacccatttcagccagccggtacgtgtgactacc
gagctgggtattgcccgccataccgccaacgccaaggccaatgccgagcgggccgcgcaa
cagcaagtggccgagcagcaaatccacgccgacccgttcgtgctggcgatgatgcgtgag
ttcggcgcgaccatcgtgcccggctcgatcaagccccactga
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