Actimicrobium sp. CCC2.4: RHM62_17610
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Entry
RHM62_17610 CDS
T09612
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
actb
Actimicrobium sp. CCC2.4
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actb03032
]
RHM62_17610 (gyrA)
03400 DNA repair and recombination proteins [BR:
actb03400
]
RHM62_17610 (gyrA)
Enzymes [BR:
actb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RHM62_17610 (gyrA)
DNA replication proteins [BR:
actb03032
]
Prokaryotic type
DNA Topoisomerases
RHM62_17610 (gyrA)
DNA repair and recombination proteins [BR:
actb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RHM62_17610 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WPX32030
LinkDB
All DBs
Position
complement(3827376..3830033)
Genome browser
AA seq
885 aa
AA seq
DB search
MDQFAKETIPISLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVWN
RPYVKCARVVGEVMGKYHPHGDQSIYDTLVRMAQDFSLRYTLVDGQGNFGSVDGDNAAAM
RYTECRLDKIANEILADIDKDTVDFVPNYDGKEKEPTVLPTRIPNLLINGASGIAVGMAT
NIPPHNITEVIDGALHVLRNADCTIDELIEIIPAPDFPTAGIIYGVSGVRDGYRTGRGRI
VMRAKTHFEEYGKESRTAIIVDELPYQVNKKSLLERIAELVRDKKLDGISDIRDESDKSG
MRVVIELKRAEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLLNLKQMLQCFLSHRRE
VVTRRTIFELRRARERGHVLEGLAVALANIDDFIAIIKAAPTPPIAKLELMARAWDSSVV
REMLVRTGEEALGGINAFRPENLPKHYGIQPDGLYKLSDDQAQEILQMRLQRLTGLEQDK
IVNEYKEVMAQIADLLDILAKPERVTIIIVDELTAAKMEYGIGNKDERRSFIEHNATDLG
TEDLITPQDMVVTLSHTGYMKSQPISEYRAQKRGGRGKQAMATKDDDWIDQLFIANTHDY
ILCFSNRGRLYWLKVWEVPQGSRNSRGKPIVNMFPLLDGEKVTVILPVSGDNRTFPEDRY
IFMSTSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDSGKAVR
FDENDVRPMGRTARGVRGMNLEEGQQVIALLVAENEQQSVLTATENGYGKRTPITEYTRH
GRGTKGMIAIQTSERNGRVVAATLAEPSDEIMLITTGGVLIRTRVAEIREMGRATQGVTL
IAVEDGTKLSGMQRIVEPDVEEGDEVVDADADAPADDTPAADDKA
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgctaaagaaactatcccgatttcccttgaagacgagatgcgtaaaagc
tacctcgattacgcgatgagcgtgattgtcggacgggcactgccagatgtgcgtgacggt
ctcaagccggtgcatcgccgggtactgtttgcgatgcatgaaatgaacaatgtctggaac
cgcccgtacgtcaagtgcgcgcgtgtggttggtgaagtcatgggcaagtaccatcctcac
ggcgaccaatcgatctacgacacactggtgcggatggcgcaggatttttcgttgcgctac
acactggtcgatggtcaggggaatttcggttcagtcgatggcgacaacgcagcagcaatg
cgttacaccgaatgccggctagacaagatcgccaatgaaattctggccgatatcgacaag
gacaccgtcgacttcgtgccgaactacgacggcaaggaaaaagaaccgacggtactaccg
acccggattcccaacctgctgattaatggcgcttccggtattgcggtcggcatggccacc
aatatcccgcctcacaacattaccgaagtcatcgacggcgcattgcatgtattgcgcaac
gccgactgcacgatcgatgaattgatcgaaatcattcccgcgccagattttccgaccgcc
ggcattatttatggcgtctcgggcgtacgcgatggctatcgcaccggccgtgggcgcatc
gtcatgcgcgccaagacgcacttcgaggaatacggcaaggaaagccgtaccgcgatcatc
gtcgacgagttgccgtatcaagttaacaagaagtcgctgctcgagcggatcgccgagctc
gtgcgtgacaaaaagctcgatggtatttccgatatccgcgatgagtccgacaagtcgggc
atgcgtgtcgtgatcgaactcaagcgcgccgaagtgccggaagtcgtcctcaacaatctg
tacaagcagacccagttgcaagacaccttcggcatgaacatggtggcgctggtcgatggc
cagccgaagctgctgaacctcaagcagatgctgcaatgcttcctgtcgcatcgtcgcgaa
gtcgtcacgcgccggaccatttttgaattgcgccgggcgcgcgagcgcgggcatgtactc
gaaggcctggccgtcgcactggctaacatcgatgacttcattgccatcatcaaggcagca
ccaacgccgccgatcgccaagcttgaactgatggcgcgggcgtgggactcgtcagtcgtg
cgcgagatgctggtgcgcaccggcgaagaagcgctaggcggcatcaatgccttccgtccg
gaaaacctgcccaagcattacggtatccagcctgacggcttgtacaagctgtcggatgac
caggcccaggagattttgcagatgcgtctgcaacgcctgaccggtctcgaacaagacaag
atcgtcaacgaatacaaagaagtcatggcgcagatcgccgacctgctcgacatcctggcc
aagccggaacgcgtcaccatcatcatcgtcgacgagctgaccgccgccaagatggaatac
ggcatcggcaacaaggacgagcgccgctcattcatcgagcacaacgctaccgatctcggc
accgaagacctgatcacgccgcaagacatggtcgtcacgctgtcgcataccggctacatg
aagtcgcagccgatctctgaataccgcgcgcaaaaacgtggtgggcgcggcaagcaggcg
atggctaccaaggatgatgactggatcgaccagctcttcatcgccaacacgcacgattac
atcctgtgcttcagcaatcgtggccgcctttactggctcaaggtatgggaagtgccgcag
ggctcgcgcaactcgcgcggtaagccgatcgtcaacatgttcccgttgctcgatggcgaa
aaagtcaccgtgatcctgccggtgtccggcgacaaccgcaccttcccggaggaccgatac
atcttcatgtcgaccagcctcggtaccgtcaagaaaaccccgctgagcgatttcagcaat
ccgcgcaaggccggcatcattgccgtcgatctggatgaaggcgatttcctgatcggtgcc
gcactgaccgatggccagcatgacgtaatgctgttctcggattccggcaaggcagtgcgc
ttcgatgaaaacgatgtgcgtccgatgggtcgtaccgcccgcggtgtacgcggcatgaac
cttgaagaaggccagcaagtcatcgcgctgctggtcgccgaaaacgagcagcaatccgtg
ttgaccgcgaccgaaaacggctacggcaagcgcaccccgatcaccgaatacacccgtcac
ggtcgtggtaccaagggcatgatcgcgatccagaccagcgagcgtaacggtcgcgtggtg
gctgccacgctggccgagccttccgatgaaatcatgctgatcacgaccggtggcgtgctc
attcgtacccgggttgccgagatccgcgaaatgggtcgtgccacgcaaggcgtgacgctg
atcgcggtcgaagatggcaccaagctgagtggcatgcagcgcatcgttgaaccggatgtc
gaagagggtgacgaggttgttgatgccgacgccgacgcgcccgccgacgacacaccggct
gctgacgacaaagcgtaa
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