Actimicrobium sp. CCC2.4: RHM62_17940
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Entry
RHM62_17940 CDS
T09612
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
actb
Actimicrobium sp. CCC2.4
Pathway
actb00260
Glycine, serine and threonine metabolism
actb00460
Cyanoamino acid metabolism
actb00630
Glyoxylate and dicarboxylate metabolism
actb00670
One carbon pool by folate
actb00680
Methane metabolism
actb01100
Metabolic pathways
actb01110
Biosynthesis of secondary metabolites
actb01120
Microbial metabolism in diverse environments
actb01200
Carbon metabolism
actb01230
Biosynthesis of amino acids
actb01240
Biosynthesis of cofactors
actb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RHM62_17940 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RHM62_17940 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RHM62_17940 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RHM62_17940 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RHM62_17940 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RHM62_17940 (glyA)
Enzymes [BR:
actb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RHM62_17940 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
WPX32082
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Position
complement(3898700..3899944)
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AA seq
414 aa
AA seq
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MFDKNQTIAKTDPELWAAMQLETARQQDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDMAETLAINRLKALYGAEAANVQPNSGSQANQAVFFAVLKPGDTIMGMS
LAEGGHLTHGMPLNMSGKWFSVVSYGLNAAEEIDYEAMEALAREHKPKLIIAGASAYSLR
IDFERFAKIAKEVGAYFLVDMAHYSGLIAAGVYPNPVPHADFVTSTTHKSLRGPRGGIIL
MKAEFEKMINSAIFPGIQGGPLMHVIAGKAVAFKEALEPEFKTYQQQVIKNADALAKTLI
ERGLRIVSGRTESHVMLVDLRSKKITGKEAEAILGSAHMTCNKNAIPNDPEKPFVTSGIR
LGSPAMTTRGFTEIEAIKVGHLIADVLDNPHDAATIERVKVAVQQLTSAFPVYG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgttcgataaaaaccaaaccattgccaaaactgatccggaattatgggctgccatgcag
ctggagaccgcgcgtcagcaagatcacatcgagttgattgcgtcagaaaactacacgtca
cctgctgtgatggaagcgcaagggtcgcagctaactaataaatacgcagagggctatccc
ggcaagcgctattacggcggttgcgaattcgtcgacatggcagaaacattggcgattaac
cggctcaaggcgttgtatggcgcggaagccgccaatgtgcagccgaactccggatcgcaa
gctaatcaggcggtcttctttgcggtattgaaaccgggcgacaccatcatggggatgtcg
ctggcagaaggcggtcacttgacgcacggtatgccactgaacatgtccgggaaatggttc
agcgtcgtttcatatggtctcaatgcggccgaagaaattgattacgaagccatggaagca
ttggcacgcgaacataagccaaaactgattattgccggtgcatctgcctattcgctgcgt
attgactttgaacggtttgcaaaaatagccaaagaagtgggcgcctatttccttgtggat
atggcgcattactccgggctgattgctgccggcgtttatccaaaccctgttccacacgcg
gattttgtgacgtcgacaacgcacaagtcattgcgtggcccgcgcggtgggatcattttg
atgaaagccgaattcgaaaaaatgatcaactcggcaatcttcccaggtattcagggtgga
ccgttgatgcatgtgatcgccggaaaagcggtcgcgttcaaggaggcattggagccggaa
ttcaaaacgtatcagcagcaagtgatcaagaatgccgacgcattggcaaagacactgatc
gaacgtggcttgcgtattgtgtccggacggactgaatcgcacgtcatgctggtggatttg
cgctcaaagaaaattaccggcaaggaggcagaagcgatcctcggctccgcgcacatgacc
tgcaacaagaatgcgattccaaatgatccggaaaagccattcgtgacatccgggattcgt
ctcggtagccctgcgatgacaacgcgtggttttaccgagatcgaggcgattaaagtgggg
catcttattgctgatgtgctggataatcctcacgacgccgcgaccatagaacgggttaag
gtcgcagtgcagcagttgaccagcgcattccctgtctacggttga
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