Actimicrobium sp. CCC2.4: RHM62_18235
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Entry
RHM62_18235 CDS
T09612
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
actb
Actimicrobium sp. CCC2.4
Pathway
actb03030
DNA replication
actb03410
Base excision repair
actb03420
Nucleotide excision repair
actb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
actb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHM62_18235 (polA)
03410 Base excision repair
RHM62_18235 (polA)
03420 Nucleotide excision repair
RHM62_18235 (polA)
03440 Homologous recombination
RHM62_18235 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actb03032
]
RHM62_18235 (polA)
03400 DNA repair and recombination proteins [BR:
actb03400
]
RHM62_18235 (polA)
Enzymes [BR:
actb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHM62_18235 (polA)
DNA replication proteins [BR:
actb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RHM62_18235 (polA)
DNA repair and recombination proteins [BR:
actb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RHM62_18235 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RHM62_18235 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WPX32137
LinkDB
All DBs
Position
complement(3955986..3958730)
Genome browser
AA seq
914 aa
AA seq
DB search
MQNTLLLVDGSSYLYRAFHALPDLRNKEGAPTGALYGIINMLRRLRSDFPAAYIACVFDA
KGKTFRDDLYAEYKAQRASMPEDLARQVDPIHEAVRAMGWPLIMVEGVEADDVIGTLAVD
AVRHGMKAVISTGDKDLAQLVNDDVMLINTMSNERLDRDGVLAKFGVPPERIVDYLTLIG
DTVDNVPGVSKVGPKTAVKWLTQYGTLDGIVENAATIGGAVGENLRKALDWLPQAKVLIT
VKTDCDLVDHMVSIPESLQAKEQDPAKMIDLYARFGFKTWLREATAASAEEVVATAAPAD
AQSGLFDAPAAPAEQRYDTILTEADLDRWLAVIDAAALTSIDTETTSLVPLQAQLVGISL
CCEPGVAAYIPVAHRYADAPVQLSRELVLGKLQAWLEDPAKPKVGQNLKYDSHIFANHGI
TLRGIAHDTMLESYVFESHRSHDMDSLALRHLGRTTITFQEVCGKGASQICFDQVDIARA
TEYAAEDADITLQLHQAMLPQVTSDEGLLFVYEKIEVPTAVVLQKIERNGVLIDTGILQV
QSHELGKRMLEIETSAFELAGQPFNLNSPKQIGEIFFEKLQLPVVKKTPSGAPSTDEEVL
AKLAEDYPLPKVLLEYRSLSKLKSTYTDKLPKMIDPTTGRVHTNYAQTVAVTGRLASNEP
NLQNIPIRTAEGRRVREAFVAPAGSVIVSADYSQIELRIMAHLSGDANMLRAFADGIDIH
RATAAEIFSTGAADVTTEQRRYAKVINFGLIYGMSAFGLAGNLGIERGAAQSYIDKYFAR
FSGVKQFMDETRLKAKAHGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPMQGTAAD
LIKLSMVAVQGWLEADGLKSLMVMQVHDELVLEVPQEELELVRVKLPALMAGVAELKVPL
TAEVGIGKNWDEAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataccctgctgttagtcgatggttccagctacctgtaccgcgctttccatgcg
ctgcccgatctgcgcaacaaggagggcgcgcccaccggtgcgctgtacgggatcatcaac
atgctgcgccgcttgcgcagcgattttccggcggcctacattgcctgcgtcttcgatgcc
aagggcaagaccttccgcgatgacctgtatgccgaatacaaggcgcagcgcgcgtcgatg
cctgaggatctggcgcgtcaggtcgatccgatccacgaagcagtgcgggcgatgggttgg
ccgctgatcatggtcgagggtgtcgaagccgatgacgtcatcggcacgctggccgtcgac
gcggtcaggcatggcatgaaggcggtgatctcgaccggcgacaaggacctcgcgcaactg
gtcaatgacgacgtcatgctgatcaacacgatgagcaacgaacggctcgatcgcgatggc
gtgctggccaaattcggcgtgccgcccgagcgcatcgtcgattacctgaccctgatcggc
gacaccgtcgacaacgtgccgggcgtctccaaggtcggtccgaagaccgccgtcaaatgg
ctcacgcaatacggcacgctcgatggcatcgtcgagaatgcggcgaccatcggcggcgcg
gttggcgagaacttgcgcaaggcgctggactggctgccgcaagccaaggtgctgattact
gtgaagaccgattgcgatctggtggaccatatggtgtcgatcccggaatcgctgcaggcc
aaggagcaggacccggcgaagatgatcgacctgtatgcgcgcttcgggttcaagacctgg
ctgcgggaagcgacggcggccagtgcagaagaggtcgttgcgactgccgcacccgccgac
gcacaaagcggcttgttcgatgcgcctgctgccccggccgaacagcgctacgacaccatc
ctgaccgaagccgacctcgatcgctggctggccgtcatcgatgccgccgcgctgacttcc
atcgatactgaaaccacctcgctggtgccgctgcaggcgcaattggtcggtatctcgttg
tgctgcgagccgggtgtcgcggcgtatattccggtcgcgcatcgctatgccgatgcgcct
gtgcagttgtcgcgcgaactggtgctcggtaaattgcaggcctggctcgaagatccggcc
aagcccaaggtcggccagaacctgaagtacgacagccatatttttgccaaccacggcatc
accttgcgcggcatcgcgcatgacacgatgctcgaatcgtatgtctttgaatcgcaccgc
agccatgacatggacagcctcgcgctgcgtcatctgggccgcaccacgatcaccttccag
gaagtctgcggcaagggcgcctcgcaaatctgcttcgaccaggtcgacatcgcccgcgcc
accgaatacgccgccgaggatgccgacatcacgctgcaactgcatcaggccatgctgccg
caagtgaccagcgacgaggggctgctgttcgtctacgaaaaaatcgaagtgccgactgcg
gtcgtgctgcagaagatcgagcgcaacggcgtgctgatcgataccggcattttgcaggtt
cagtcgcatgaactcggcaagcggatgctggaaatcgagacctcggcctttgagctcgcc
ggccagcccttcaacctgaattcaccgaagcagatcggtgaaatcttctttgaaaaactg
cagctgccggtggtcaagaagacgccgtccggcgcaccctcgaccgatgaagaagtgctc
gccaagctggccgaagattacccgctgccgaaagtgctgctcgaataccgcagcctgtcg
aaactgaaatcgacctacaccgacaagctgccgaagatgatcgacccgaccaccggccgg
gtccataccaactatgcgcagacggtggccgtgaccggccggctggcctcgaacgaaccg
aacctgcagaacatcccgatccgtaccgccgaaggccggcgtgtgcgcgaagccttcgtc
gcgccggccggcagcgtgatcgtctcggccgattattcgcagatcgaattgcgcatcatg
gcgcacctgtccggcgacgccaacatgctgcgcgcgtttgccgacggcatcgacatccat
cgtgctaccgctgccgaaatcttttcgactggcgctgccgacgtgacgactgagcagcgt
cgctatgccaaggtcatcaacttcggcctgatctacgggatgagcgcgttcgggctggcc
ggcaatctcggcatcgagcgcggtgctgcgcagagctacatcgacaagtacttcgcgcgc
ttttccggggtcaagcaattcatggacgagacgcgcctgaaagccaaggcgcatggctat
gtcgagacggtgttcggacgccgcctgtggctgcccgaaatcaattcgccgaacggtccg
cgccggcaaggtgccgagcgcgccgcgatcaacgcgcctatgcagggcacggcggctgac
ctgatcaagctgtcgatggtggcagtgcagggctggctcgaagccgacggactcaagtcg
ctgatggtgatgcaggtgcacgatgaactggtgcttgaagtgccgcaggaagagctggaa
ctggtgcgggtgaaattgccggcgctgatggccggcgtggccgagctgaaggtgccgctg
acggccgaagtcggtatcggcaagaattgggacgaggcacactga
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