Actinomyces sp. Chiba101: CHIBA101_0259
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Entry
CHIBA101_0259 CDS
T05279
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
actc
Actinomyces sp. Chiba101
Brite
KEGG Orthology (KO) [BR:
actc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actc03032
]
CHIBA101_0259
03400 DNA repair and recombination proteins [BR:
actc03400
]
CHIBA101_0259
Enzymes [BR:
actc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CHIBA101_0259
DNA replication proteins [BR:
actc03032
]
Prokaryotic type
DNA Topoisomerases
CHIBA101_0259
DNA repair and recombination proteins [BR:
actc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CHIBA101_0259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BAW92132
LinkDB
All DBs
Position
304648..307605
Genome browser
AA seq
985 aa
AA seq
DB search
MPRKLVIVESPNKVRSIAGYLGPDFDVEASVGHIRDLAQPSELPAKEKKGPYGRFAVDVE
DGFKPYYVVNPDKKKTVTALKKALKEADELYLATDDDREGEAIAWHLLEVLKPKVPVKRM
TFTEITKEAVTRALDSTRDIDSHRVDAQETRRILDRLVGYEVSPVLWRKVRAGLSAGRVQ
SVATRLVVERERERMAFVPAGYWGVEAALTTGLSGLDAAARAEGSFTARLSALDGRRVAT
GRDFTDGGELTESARKAGTVHLHEGAAKAIAEAVMRAVPRVAEVEDKPYRRRPAAPFTTS
TLQQEASRKLRMNPRETMRVAQGLYENGFITYMRTDSTVLSGQAVAAARAQVAELYGPEY
VPAKARVYATKTKGAQEAHEAIRPAGDHFRTPAQVSGELSGAQFRLYELIWKRTVASQMA
DAVGSTATVRVEVPLAPADGGSRDSGQTFSTASFTASGTVITFRGFLAAYEEGRDAERYS
EAAAGSVGGAGESGSAGAGGAGGGAGAGGGSASSRETRLPAMIAGQELAALGAEAAGHET
TPPPRYTEASLVKALEEREIGRPSTYAATMSTISDRGYVDHRGQALVPTWLAFAVTRLLE
ENFAELVDYDFTASMEADLDRIAAGEADRVAWLTRFYFGADGTGSSDAAGAARAAGAAQG
SGSTGGVGQDGERSLRAMLDTLGEIDARAINSVPIGEGMTLRVGRYGPYLESEDGKRANV
PADLAPDELTVERARELFARAADDGRELGVDPSTGHTIIAKDGRYGPYVTEVLPAPEGGA
DEEATASGAKRKRTTKKAAGPKPRTASLLKSMDLSTVTLEQALDLLSLPRVVGQDAEGVD
ITAQNGRFGPYLKKGTDSRSLASEEQIFTVTLEEALALFAQPKTRRGQAAARGPLRELGT
DPTTGKPVVIKDGRFGPYFTDGETNVTLRRGDDPATVTPERAYELLAEKRAKGPTKKRTT
RKTAAKKTTAKKTPSKKTAAKNTDS
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
gtgccccgcaagctcgtcatcgtcgagtccccgaacaaggtccgctcgatcgccggatac
ctgggccccgatttcgatgtcgaggcctccgtgggccatatccgcgacctcgcccagccc
tccgagctcccggccaaggagaagaagggcccctacgggcgcttcgccgtcgacgtcgag
gacgggttcaagccgtactacgtcgtcaacccggacaagaagaagaccgtcactgcgctt
aagaaggccctcaaggaggccgacgagctctacctggccaccgatgacgaccgcgagggc
gaggccatcgcctggcacctcctggaggtcctcaagcccaaggtgccggtcaagcggatg
accttcaccgagatcaccaaggaggccgtcacccgcgccctggactccacgcgggacatc
gactcccatcgcgtggacgcccaggagacccgccgcatcctcgaccggctcgtcggctac
gaggtcagccccgtcctgtggcgcaaggtccgcgcgggcctgtccgccgggcgcgtgcag
tccgtggccacccgcctcgtggtggagcgcgagcgcgagcgcatggccttcgtgcccgcc
ggctactggggcgtcgaggccgcgctcaccacgggcctgagcggcctcgacgcggccgcc
cgcgccgagggctctttcacggcccggctgtccgccctcgatggacgccgcgtggccacc
gggcgcgacttcaccgatggcggcgagctgacggagtcggcccgcaaggcgggcaccgtc
cacctccacgagggcgcggccaaagcgatcgccgaggccgtcatgcgcgccgtcccgcgc
gtggccgaggtggaggacaagccctacaggcggcgcccggccgcccccttcaccacctcc
accctccagcaggaggcctcccgcaagctccgcatgaacccgcgcgagaccatgcgcgtg
gcccagggcctgtacgagaacggcttcatcacctacatgcgcaccgactccacggtgctc
tccggccaggccgtggccgccgcccgcgcgcaggtcgccgagctctacgggcccgagtac
gtgcccgccaaggctcgcgtctacgccacgaagaccaagggcgctcaggaggcccacgag
gccatccggcccgccggcgaccacttccgcacccccgcgcaggtcagcggtgagctcagc
ggcgcgcagttccggctctacgagctcatctggaagcggaccgtcgcctcccagatggcc
gacgccgtcggctccaccgcgaccgtccgagtggaggtgcccctggcgcccgccgatggc
ggctcgcgcgactccgggcagaccttctccaccgcgtccttcaccgcctcgggcaccgtc
atcaccttccgcggcttcctggccgcctacgaggaggggcgcgacgccgagcgctactcc
gaggccgccgcgggcagtgtcggtggggccggcgagtccggcagcgccggggcgggcggc
gcgggcggcggtgctggcgccggtggcgggagcgcgtcgtcgcgcgagacgcgcctgccc
gccatgatcgccgggcaggagctcgcggccctcggcgccgaggccgccgggcacgagacc
accccgccgccgcgctacaccgaggcgtccctggtcaaggcactggaggagcgcgagatc
ggccgcccctccacctacgccgccacgatgtccaccatctccgatcgcggctacgtggac
caccggggccaggccctcgtgcccacctggctggccttcgccgtcacgcgcctgctggag
gagaacttcgccgagctggtggactacgacttcaccgcctccatggaggccgacctcgac
cgcatcgccgccggggaggcggaccgggtcgcctggctgacccgcttctacttcggggcc
gacgggacgggctcatctgatgccgccggggccgcgagggccgccggggccgcgcaaggc
tcggggagcactgggggagtgggccaggatggcgagcgcagcctgcgcgccatgctcgac
acgctcggcgagatcgacgccagggccatcaactccgtgccgatcggcgagggcatgacc
ctgcgcgtgggccgctacggcccctacctggagtccgaggacggcaagcgcgccaacgtg
cccgccgacctcgccccggatgagctgaccgtcgagcgcgcccgtgagctcttcgcccgc
gccgccgacgacggtcgtgaactcggcgtcgacccatccaccggccatacgatcatcgcc
aaggacgggcgctacgggccctacgtcaccgaggtgctgcccgccccggagggcggggcc
gatgaggaggcgacggcgtcgggagcgaagaggaagcggaccacgaagaaggccgccggg
cccaagccgcgcacggcgagcctgctgaagtccatggacctgtccaccgtcaccctggag
caggcgctcgacctgctcagcctgccgcgcgtggtgggccaggacgccgagggcgtggac
atcaccgcgcagaacgggcgcttcgggccctacctgaagaaggggacggactcgcgctcc
ctggcctccgaggagcagatcttcacggtgaccctggaggaggcgctcgcgctcttcgcc
cagcccaagacccgccgcggccaggccgccgcgcgcgggcccctgcgcgagctcggcacg
gatccgaccaccggcaagcccgtggtcatcaaggacgggcgcttcggcccctacttcacc
gacggcgagacgaatgtgacgctgcgccgcggtgacgacccggccaccgtcacccccgag
cgcgcctacgagctcctcgccgagaagcgcgccaagggcccgaccaagaagcgcaccacc
cgcaagaccgccgccaagaagacgactgccaagaagactccctccaagaagaccgccgcg
aagaataccgactcataa
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