Actinomyces sp. Chiba101: CHIBA101_0330
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Entry
CHIBA101_0330 CDS
T05279
Name
(GenBank) very short patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
actc
Actinomyces sp. Chiba101
Brite
KEGG Orthology (KO) [BR:
actc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actc03400
]
CHIBA101_0330
DNA repair and recombination proteins [BR:
actc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CHIBA101_0330
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Yop-YscD_ppl_1st
Motif
Other DBs
NCBI-ProteinID:
BAW92202
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Position
394314..394820
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AA seq
168 aa
AA seq
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MTPSSTPTEPGRPAGPDPGGEPEARTGAEWAAVSWASSPGVARSMRSNRRRDTRPELAIR
RLLHAHGLRYRVDMAPWSNKRRRADIVFTRQRLAVFIDGCFWHGCPEHATTPATNTDYWR
PKLARNIERDRETTAMAEAEGWRVLRIWEHVPPEEAVALILKARKEGP
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgtcgtcgacgccgactgaacccgggcggccggctgggccggatcctggggga
gagccggaggcccggacgggagccgagtgggctgcggtctcctgggcgtcgtcgcccggc
gtggccagatcgatgcgctcgaacaggcgcagggacacgcgcccggaactcgcgattcgc
cgcttgctgcacgcccacggcctgcgctaccgggtggacatggcgccatggagcaataag
cgacggcgcgcggacatcgtgttcacgcgccagcgcctcgccgtcttcatcgatggctgc
ttctggcacggctgccccgagcacgcgaccacgccggcgacgaacaccgactactggcgc
cccaagctcgccaggaacatcgaacgcgaccgcgagaccactgcgatggccgaggcggag
ggatggagggtgctgcgcatctgggagcacgtccctccggaggaggccgtggcgctcatc
ctcaaggcgcggaaggaggggccatga
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