Actinomyces sp. Chiba101: CHIBA101_0623
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Entry
CHIBA101_0623 CDS
T05279
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
actc
Actinomyces sp. Chiba101
Pathway
actc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
actc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CHIBA101_0623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
actc03021
]
CHIBA101_0623
03400 DNA repair and recombination proteins [BR:
actc03400
]
CHIBA101_0623
Enzymes [BR:
actc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CHIBA101_0623
Transcription machinery [BR:
actc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CHIBA101_0623
DNA repair and recombination proteins [BR:
actc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CHIBA101_0623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
SAP
Motif
Other DBs
NCBI-ProteinID:
BAW92489
LinkDB
All DBs
Position
709680..710678
Genome browser
AA seq
332 aa
AA seq
DB search
MLIAQRPTLTEEVVEENRRARFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRIDGV
PHEFRTIAGVKEDVAQIILNIKEIVLSSENDEPVVMYLRKSGPGAVTAGDITPPAGVEIH
NPELVIATLNEKGKLEIELTVERGRGYVSATQNKDPNAEISRIPVDSIYSPVKKVSYAVE
ATRVEQRTDFDRLIVDVETKASITPRDALASAGKTLVELFGLARELNVEAEGIEVGPSPM
DQALQQDLALMIDELDLQARSSNALKREGIHTVGELVSRSEADLLDIRNFGAKSISEIKD
KLAELGLSLKGSPLDYLAEDDYTNPTFSDEQA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgtcccaccctcacggaggaggtcgtcgaggagaaccgccgggcg
cggttcatcatcgagcccctcgagcccggattcggctacaccctgggcaactccctgcgc
cgcaccctgctgtcgtccatcccgggcgccgcagtgaccagtgtgcgcatcgacggggtc
ccccacgagttccgcacgatcgccggggtcaaggaggatgtcgcccagatcatcctcaac
atcaaggagatcgtcctctccagtgagaacgacgagccggtcgtcatgtacctgcgcaag
tccggcccgggcgccgtcaccgccggtgacatcaccccgcccgccggcgtcgagatccac
aatcccgagctggtcatcgcgaccctcaacgagaagggcaagctggagatcgagctgacc
gtggagcgcggtcgcggctacgtctcggccacccagaacaaggacccgaacgcggagatc
tcccggatcccggtcgattccatctactcgccggtcaagaaggtctcctacgccgtggag
gccacgcgcgtcgagcagcgcaccgacttcgaccgcctcatcgtcgacgtcgagacgaag
gcctcgatcacgccccgcgacgcgctcgcctcggcgggcaagaccctcgtcgagctcttc
ggcctggcccgggagctcaacgtcgaggccgagggcatcgaggtcggcccctcgcccatg
gatcaggcccttcagcaggatctcgccctcatgatcgacgagttggacctccaggcccgc
tcctccaacgccctcaagcgcgagggcatccacaccgtcggcgagctcgtctcgcgcagt
gaagcggacctgctcgacatccgcaacttcggtgccaagtcgatctccgagatcaaggac
aagctcgccgagctgggcctgtccctcaagggctcccccctggactacctcgccgaggac
gactacaccaaccccaccttcagcgacgagcaggcctga
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