Actinomyces sp. Chiba101: CHIBA101_0953
Help
Entry
CHIBA101_0953 CDS
T05279
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
actc
Actinomyces sp. Chiba101
Brite
KEGG Orthology (KO) [BR:
actc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
actc03016
]
CHIBA101_0953
Enzymes [BR:
actc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CHIBA101_0953
Transfer RNA biogenesis [BR:
actc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CHIBA101_0953
Prokaryotic type
CHIBA101_0953
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BAW92818
LinkDB
All DBs
Position
1089086..1090159
Genome browser
AA seq
357 aa
AA seq
DB search
MSRPRVARGAVTADDGLLLIDKPAGVTSHDVVAAARRMGATRKVGHAGTLDPMATGLLIL
GIGRATRFLTHLVGADKVYEATVRLGQETLTEDAEGEPTAWRGCPLPRADEARADLQERI
EAALTSLTGPIMQVPSAVSAIKVNGVRSYKRVRDGEEVTLAPRPVTIHAITPLGALRPGI
VAGQEGQEVPVVDLDLRVSCSSGTYIRALARDLGEALGCGAHLTALRRTRVGPFDVAEAL
SLDRASAQVEAGVDDDPPSGLPTLPLAEAGRRCFPAVELSREEARAIRHGRGLPAAALDR
AGPVPARPVVAKAAKASGDEYGEESGVVAGFDPDGVLVALLIRKGGRARPALVLSPA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgcccccgggtcgcccgcggcgccgtcaccgccgacgacggcctcctcctcatc
gacaaacccgccggggtgacgagccacgatgtcgtcgccgccgcacgccgcatgggcgcc
acccgcaaggtcggccacgccggcaccctcgaccccatggccaccggcctgctcatcctc
ggcatcggccgcgccactcgcttcctcacccacctcgtgggcgcggacaaggtctacgag
gccaccgtgcgcctggggcaggagaccctcaccgaggacgccgagggcgagcccaccgcg
tggcggggctgccccctcccgcgggcggatgaggcgcgagccgatctccaggagaggatc
gaggccgctctcacgtcgctgaccggcccgatcatgcaggttcccagcgccgtttccgcc
atcaaggtcaatggcgtgcgctcctacaagcgcgtgcgcgacggcgaggaggtcaccctg
gcaccccgtcccgtcaccatccacgccatcacccccctcggggccctgcgcccgggaatc
gtggcgggccaggagggccaggaggtgcccgtcgtcgacctcgatctgcgggtgtcctgc
tcctcggggacctacatccgtgccctggcgcgcgatctcggcgaggccctgggctgcggc
gcgcacctgaccgccctgcgccgcacccgcgtcggccccttcgatgtggccgaggccctc
tccctcgaccgggccagcgcccaggtggaggccggcgtcgacgatgatccgccatcgggg
ctgcccacactgcccctggccgaggccggccggcgctgcttccccgccgtcgagctcagc
cgcgaggaggctcgcgcgatccgtcacgggcggggactgcccgcggcggcgctggatcgc
gcgggtccggtgcccgcgcgccccgtggtcgcgaaagcggcgaaggcctccggtgacgag
tacggcgaggagagcggcgtcgtcgccgggttcgatcccgacggcgtcctcgtggcactg
ttgatccgaaagggcgggcgggcccggccggccctcgtcctatcaccagcatga
DBGET
integrated database retrieval system
