Actinomyces sp. Chiba101: CHIBA101_0961
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Entry
CHIBA101_0961 CDS
T05279
Name
(GenBank) guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
actc
Actinomyces sp. Chiba101
Pathway
actc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
actc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHIBA101_0961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
actc03019
]
CHIBA101_0961
03016 Transfer RNA biogenesis [BR:
actc03016
]
CHIBA101_0961
Enzymes [BR:
actc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CHIBA101_0961
Messenger RNA biogenesis [BR:
actc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CHIBA101_0961
Transfer RNA biogenesis [BR:
actc03016
]
Prokaryotic type
tRNA degradation factors
CHIBA101_0961
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
PCB_OB
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
BAW92826
LinkDB
All DBs
Position
1097074..1099479
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AA seq
801 aa
AA seq
DB search
MFIDDPEVTAAEAVIDNGSFGKRVIRFETGRLAKQAAGSAMAYLDGETAILSATTVGKHP
KDQFDFFPLTVDVEERQYAAGRIPGSFFRREGRAGTSAILACRLIDRPLRPSFVKGLRNE
VQVVETILAIHPDDAYDVLAINAASMSTQIAGLPFAGPVAGTRLALIDGQWVAFPRWSEL
ERATFNMVVAGRVLEDGDVAIMMVEAGGTENMMDLIAAGATAPTEAVVAEALEAAKPHIK
ALCEAQMEVAEHASKPTAEFPLYLDYSDEQYEAVEKAAQAHDLAAAIATEGKHARDEAID
AVRDQVLADLAEAFPAEEDAKALKAAFRSVTKKVVRHRTLTEGIRMDGRGLKDIRTLGAE
VEVLPRVHGSAIFERGETQIMGVTTLNMLRMEQQIDDLSPITHKRYMHQYVFPPFSTGET
GRVGAPKRREIGHGALAERALVPVLPSRDDFPYAIRQVSEALGSNGSTSMGSVCASTLSM
AQAGVPLRDRVAGIAMGLMHEVIDGETKWATLTDILGSEDAFGDMDFKVAGTRDFITALQ
LDTKLDGLPSEVLAGALGQARDARFHILNLIDEALGDEPFEMAPTAPRVLTVKIPVDKIG
EVIGPKGKMINQIQEDTGADLTVEDDGTIYIGATDGPSAEAAREAVNAIANPQMPEIGER
FIGTVVKTTTFGAFVSLSPGKDGLLHISQIRRLVGGRRVENVEDVLAVGDKVQVELAEID
PRGKLSLHAVLTEEQQASEDEARAHRGERSEGAERRERRPRRARAASADSEDAEAGDAEG
SERRERRPRRRRTRTAEASED
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgttcattgatgaccccgaggtcaccgccgccgaggcagtgatcgacaacggctccttc
ggcaagcgcgtgatccgcttcgagaccggccgcctggccaagcaggccgcgggcagcgcc
atggcctacctcgacggcgagaccgccatcctgtccgccaccaccgtgggcaagcacccc
aaggaccagttcgacttcttcccgctgaccgtggatgtcgaggagcgccagtacgccgcc
ggccgcatccccggctccttcttccgccgcgagggccgcgccggcacctccgccatcctg
gcctgccgcctcatcgaccgccccctgcgtccctccttcgtcaagggcctgcgcaacgag
gtccaggtcgtcgagacgatcctcgcgatccaccccgacgacgcctacgacgtcctggcg
atcaacgccgcctccatgtccacccagatcgcgggcctgcccttcgccggaccggtggcg
ggcacccgcctggccctcatcgacggccagtgggtggccttcccccgctggtccgagctc
gagcgcgccaccttcaacatggtcgtggccggccgcgtcctcgaggacggcgacgtcgcc
atcatgatggtcgaggccggcggcaccgagaacatgatggacctcatcgccgccggcgcc
actgcccccaccgaggccgtcgtcgccgaggccctggaggccgccaagccgcacatcaag
gccctgtgcgaggcccagatggaggtcgccgagcacgcctccaagcccaccgccgagttc
cccctctacctggactactccgacgagcagtacgaggccgtcgagaaggccgcccaggcc
cacgacctcgccgccgccatcgccaccgagggcaagcacgcccgcgacgaggccattgac
gccgtgcgcgaccaggtcctggccgacctcgccgaggccttcccggccgaggaggacgcc
aaggccctcaaggccgccttccggtccgtcaccaagaaggtcgtgcgccaccgcaccctc
accgagggcatccgcatggacggccgcggcctgaaggacatccgcaccctgggcgccgag
gtcgaggtcctgccccgcgtccacggctcggcgatcttcgagcgcggcgagacccagatc
atgggcgtgaccaccctcaacatgctgcgcatggagcagcagatcgacgacctctcgccg
atcacccacaagcgctacatgcaccagtacgtcttcccgcccttctccaccggcgagacc
ggccgcgtcggcgcccccaagcgccgcgagatcggccacggcgccctggccgagcgggcc
ctcgtgcccgtcctgcccagccgcgacgacttcccctacgccatccggcaggtctccgag
gccctgggctccaacggctcgacctccatgggctccgtgtgcgcctcgaccctgtcgatg
gcccaggccggcgtgccgctgcgcgaccgcgtggccggcatcgccatgggcctcatgcac
gaggtgatcgacggcgagaccaagtgggccaccctcaccgacatcctcgggtccgaggac
gccttcggcgacatggacttcaaggtcgccgggacccgtgacttcatcacggccctccag
ctcgacaccaagctcgacggcctgccctccgaggtgctcgccggggcgctcggccaggcc
cgcgacgcccgcttccacatcctcaacctcatcgacgaggccctgggcgacgagcccttc
gagatggcccccaccgccccgcgcgtgctgaccgtcaagatccccgtcgacaagatcggc
gaggtcatcggccccaagggcaagatgatcaaccagatccaggaggacaccggcgcggac
ctgacggtcgaggacgacggcacgatctacatcggcgccaccgacggcccgtccgccgag
gccgcccgcgaggccgtcaacgccatcgccaacccgcagatgcccgagatcggcgagcgc
ttcatcggcactgtcgtcaagaccacgaccttcggcgccttcgtgtccctgtccccgggc
aaggacggcctgctgcacatctcccagatccgccggctcgtcgggggcaggcgcgtggag
aacgtcgaggacgtcctggcggtgggcgacaaggtccaggtcgagctcgccgagatcgac
ccgcgcggaaaactcagcctgcacgccgtcctcaccgaggagcagcaggcctcggaggac
gaggcccgcgcccaccgcggtgagcgctccgagggggccgagcgccgtgagcgccgcccc
cgccgcgcccgcgccgcctccgccgactcggaggatgccgaggcgggcgacgccgagggc
tctgagcgccgtgagcgccgcccgcgccgccgtcgcacccgtaccgcggaggcctccgag
gactga
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