Actinomyces sp. Chiba101: CHIBA101_1089
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Entry
CHIBA101_1089 CDS
T05279
Name
(GenBank) GIY-YIG catalytic domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
actc
Actinomyces sp. Chiba101
Pathway
actc03030
DNA replication
actc03430
Mismatch repair
actc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
actc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHIBA101_1089
03430 Mismatch repair
CHIBA101_1089
03440 Homologous recombination
CHIBA101_1089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actc03032
]
CHIBA101_1089
03400 DNA repair and recombination proteins [BR:
actc03400
]
CHIBA101_1089
Enzymes [BR:
actc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHIBA101_1089
DNA replication proteins [BR:
actc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CHIBA101_1089
DNA repair and recombination proteins [BR:
actc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CHIBA101_1089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
BAW92954
LinkDB
All DBs
Position
complement(1246428..1248161)
Genome browser
AA seq
577 aa
AA seq
DB search
MPPPTRSADGSHDPRSGASHPRGRPGTQGSFEDMGTPLREATFVVVDLETTGAGPGAHAI
TEIGAVRVRGGIVDDEFSTLANPGAPIPAQITLLTGITNAMVATAPALEEALAAFLAWSR
RTSPTDDGAADPILVAHNARFDVGHLRGAARALGLPWDEPRIVDTLALARKAWSRTDVPN
HKLGTLAAFVGSPTRPTHRALDDARATVDVLHAALEALAPLGITHVEDLATAADPIPAKR
RAKARLADPLPHAPGVYEFLSPAGQALYIGSASDLHRRVRSYFTAAEKRGRIARMLDTAV
SVRHIETPTEIEARVRELRLIAELDPPLNRRSRAPQRRPWLRVDQGRRGAGPRLALTTAL
PTGAVAEAIGPFPSRAAGAEAQRAAESVLRLSAWDGTGLRQVSGDDSPADAETARRALAG
SIDLVAVPILERVAGLAERERYEEAGAWTSRLRSLLLGARRAETARPLLLCPHLIAARRR
ETGGWELVAVRWGRLAGSLVTPPGADPRPYVDALRATAQVVDRPERVGRAASVEETLLLT
PWVLDDGARLVEVDGDPSVLAWPIGAAARHQRVIDAG
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgcccccacccacgcgttccgccgacggctcccacgatccgcgctccggtgcctcccat
ccgcggggccgccccggcacgcagggctcgttcgaggacatgggcacgcccctgcgcgag
gcgaccttcgtcgtcgtcgacctggagaccaccggcgcgggccccggcgcccacgccatc
accgagatcggggccgtccgcgtgcgcggcggcatcgtcgacgacgagttctccaccctg
gcgaaccccggagcgcccatccccgcccagatcacgctgctcaccgggatcaccaacgcc
atggtcgcaaccgcgccggcccttgaggaggcgctcgccgcgttcctggcctggtcccgc
cggacctccccgaccgatgacggggccgccgacccgatcctcgtggcgcacaacgcccga
ttcgacgtcggccacctgcgcggcgccgcccgcgctctgggcctgccctgggacgagccc
cgcatcgtcgacaccctcgccctggcgcgcaaggcctggtcccgcaccgacgtgcccaat
cacaagctcggcaccctcgccgccttcgtcggctcccccacccgccccacgcaccgagcc
ctcgacgacgcccgcgccaccgtcgacgtcctccacgccgccctcgaggccctcgcgccg
ctgggcatcacccacgtggaggacctggccaccgcggcggaccccatccccgccaagcgc
cgcgccaaggcacgtctggccgacccgctcccccacgccccgggcgtctacgagttcctc
tcccccgcagggcaggcgctctacatcggcagcgcctccgacctccaccgccgcgtgcgc
tcctacttcaccgccgcggagaagcgcggtcgcatcgcccgcatgctcgacaccgccgtg
agcgtgcgccacatcgagacacccaccgagatcgaggcccgcgttcgcgaactgcgcctc
atcgccgaactcgacccgcccctcaaccgccgctcccgcgcgccccagcgccggccctgg
ctacgcgtggaccaggggcgccggggcgccggtccgcgcctggcgctgaccaccgcactg
cccaccggggccgtggccgaggccatcggccccttcccctcccgagcggccggtgccgag
gcgcagcgggccgccgagtcggtcctgcggctgagcgcctgggacggcacgggtctgcgc
caggtctcgggcgacgactcccccgccgacgccgaaaccgcgcgccgggccctggccggg
agcatcgacctcgtggccgtgcccatcctggagcgcgtggccggcctggccgagcgcgag
cgctacgaggaggcgggcgcatggacctcccgcttgcgctcactgctcctgggcgcgcgt
cgcgcggagaccgccaggcccctgctcctctgcccgcacctcatcgccgccaggcgccgc
gagacgggcggctgggagctcgtcgccgtgcgctgggggcgactggcgggatcgctcgtc
accccgcccggcgcggacccgcgcccctacgtggacgccctgcgcgccacggcccaggtc
gtcgaccgccccgagcgcgtgggacgggcggccagcgtggaggagacgctgctgctgacc
ccctgggtcctcgacgacggcgcccgcctcgtcgaggtcgacggcgatccgtccgtcctg
gcctggcccatcggcgccgccgcccgccaccaacgggtcatcgacgcgggttga
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