KEGG   Actinomyces sp. Chiba101: CHIBA101_1663
Entry
CHIBA101_1663     CDS       T05279                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
actc  Actinomyces sp. Chiba101
Brite
KEGG Orthology (KO) [BR:actc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:actc03032]
    CHIBA101_1663
   03036 Chromosome and associated proteins [BR:actc03036]
    CHIBA101_1663
   03400 DNA repair and recombination proteins [BR:actc03400]
    CHIBA101_1663
DNA replication proteins [BR:actc03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CHIBA101_1663
Chromosome and associated proteins [BR:actc03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CHIBA101_1663
DNA repair and recombination proteins [BR:actc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CHIBA101_1663
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF7342
Other DBs
NCBI-ProteinID: BAW93503
LinkDB
Position
complement(1958083..1958367)
AA seq 94 aa
MSVNRTELIAAIAAKTSLKKTEADAFLAAFQDVLVESVSKGEAVKITGLMGVERVKRAAR
TGRNPRTGEEIQIPAGYGVKLTVGSALKKAVADN
NT seq 285 nt   +upstreamnt  +downstreamnt
atgtccgtcaaccgcaccgagctcatcgcggccatcgccgccaagaccagcctgaagaag
accgaggccgatgccttcctcgctgccttccaggacgttctcgtggagagtgtctcgaag
ggtgaggctgtcaagatcacgggcctgatgggcgtggagcgcgtcaagcgcgctgcccgc
actggccgcaacccccgcaccggtgaggagattcagatccccgcgggctacggcgtgaag
ctgaccgtgggctcggccctcaagaaggccgtcgccgacaactga

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